Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3111 |
Symbol | |
ID | 8884310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3282695 |
End bp | 3284317 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003511875 |
Protein GI | 291300597 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0317761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.310337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTTT TCGACGACGT CTCGGTTCGC TACCCCGAAG CCGACCACGA CGTCCTCAGC CGGGTGAACC TCGAGATACC CGAGGGGGAG CTGTGCCTCG TCGTGGGCGC CACCGGTTCC GGGAAGTCCA CACTGCTGTC GTGCGTCAAC GGCCTGGTCC CGCACTTCAC CGGCGGCGAG GTCACCGGAC GCATCACCGT GGACGGACGC TCCACGCGCG ACAACCGGCC CGCCGAACTG GCCGACGTCG TCGGCTACGT CGGCCAGGAT CCGTTGGCGG GCTTCGTCTC CGAGTACGTC GAGGAGGAGC TGGCCTACGC GATGGAGTCG CTGGGCACCT CCGACGAGGT GATGCGCAAA CGAGTCACCG AGACCGTGGA CCTGCTGGGG CTGGCCGACC TGCGCGACCG TCCGCTGGGG AGCCTGTCGG CGGGACAGCG GCAGCGCGTC GCCATCGGGG CGGCCCTGAC CGCGCAGCCA CGGATCCTGG TCCTGGACGA ACCGACCTCG GCGCTGGACC CCGGCGCGGC CGAGGAGGTG CTGGCGGCCC TGCACCGGCT CGTCCACGAC CTCGGCGTGA CGGTGCTGCT GGCCGAGCAC CGGCTGGAGC GGGTGGTGCA GTACGCCGAC CGCGTCGTCC TGGTGCGCGG CGGCGAAACC GGTGTGACGG CGGGAGAACC GGGGGAGGTG CTGCGGTCGT CGCCGGTGGC GCCGCCGGTG GTGCGACTGG CCAAGGCCAT GGCGTGGCCG ACCGTCCCGG TGTCGGTGCG GCAGGCCCGG CGAGCGGCCA CCGACCTGCG GCAGCGGCTC ACGGACACGA CCGAGCCCCC ACCCCCGAAT GCCCCCGCGA ACGCCGACCG CCCCTTTGTC GAAGTGCGTC GCCTGACCGT CCGCTACCCC GGAGTCGAAG CGGTGCGCGG CATCGACCTC GACATCGCCG AAGGCGAACG CGTCGCCGTC ATGGGCCGCA ACGGTTCCGG CAAGTCGAGC CTGCTGTGGG CGATGCAGGG CACCGGACGG CGCGACGCCG GGACGGTACG CGTCGCGGGC CGCGACCCGA AGACGCTCGA CCCCCGTGAA CGACGCCAGC TCGCCGGGCT GGTGCCCGCC GAACCCACCG ACCTGCTGTA CGCCGAGACC GTCGCCGCCG AATGCGAACA GGCCGACCGC GAATCGGATG CGCCGCCCGG CCGCTGCCGC GACATCCTGT CCACACTCGT GTCCGATGTC GACCCCGCCA CCCACCCCCG GGACCTGTCG GAAGGGCAGC GACTCGCGCT CGCGGTGGCC GTGTCCATGA CCGCCGAACC CGCACTGCTG CTCATGGACG AACCCACCCG CGGCCTCGAC TACCCCGCCA AAGCCGAACT GGCCACGATG CTGCACGCCC TGTCCGCCAC CGGAAAGACC AGCCTCGTCA CCACTCACGA CGTCGAGTTC GCCGCCGAAT ACGCCACCCG CGTCATCGTG GTGTCCGACG GCGAGATCGT CGCCGACGGG CCCGCCCGCG ACATCGTGAC GTCCTCGGCC ATCTTCGCCC CACAGGTGTC CAAAGTGCTG GCACCGGCCC CGTACCTGAC GGTGTCCGAA GTGGTCCAGG CACTCGGGGA GGTACCGGCA TGA
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Protein sequence | MIVFDDVSVR YPEADHDVLS RVNLEIPEGE LCLVVGATGS GKSTLLSCVN GLVPHFTGGE VTGRITVDGR STRDNRPAEL ADVVGYVGQD PLAGFVSEYV EEELAYAMES LGTSDEVMRK RVTETVDLLG LADLRDRPLG SLSAGQRQRV AIGAALTAQP RILVLDEPTS ALDPGAAEEV LAALHRLVHD LGVTVLLAEH RLERVVQYAD RVVLVRGGET GVTAGEPGEV LRSSPVAPPV VRLAKAMAWP TVPVSVRQAR RAATDLRQRL TDTTEPPPPN APANADRPFV EVRRLTVRYP GVEAVRGIDL DIAEGERVAV MGRNGSGKSS LLWAMQGTGR RDAGTVRVAG RDPKTLDPRE RRQLAGLVPA EPTDLLYAET VAAECEQADR ESDAPPGRCR DILSTLVSDV DPATHPRDLS EGQRLALAVA VSMTAEPALL LMDEPTRGLD YPAKAELATM LHALSATGKT SLVTTHDVEF AAEYATRVIV VSDGEIVADG PARDIVTSSA IFAPQVSKVL APAPYLTVSE VVQALGEVPA
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