Gene Snas_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3110 
Symbol 
ID8884309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3281592 
End bp3282698 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content73% 
IMG OID 
Productcobalt transport protein 
Protein accessionYP_003511874 
Protein GI291300596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0964246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.178901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGTG CCGGGCGGCT GCATCCGGTG GCGTGGTGGG TGTGGGCGGT GTGCCTGGCC 
ACCGCCGCCA GCCGCGTCAC CAACCCGTGG CTGCTGCTGA TGATCATGGC GGTCGCCGGT
TACGTGGTGA CCGCCCGCCG CGGCGACGAA CCCTGGTCGA ACGCCTACCG GGTGTTCCTG
ATGATCGGGT TCATCGCCAT CGGCATCCGG CTGGTGTTCC ACATCCTGTT GGGCGGCGTG
CAGGGCCCGA CGGTGCTGTT CGAGCTGCCG TCGCTGACGC TTCCCGAATG GACGCAAGGG
ATCCGCATCG GTGGACCCGT CACCCTCGAA GGGGTGCTGT TCGCCGTGTA CGACGGGCTG
CGGTTGGCGA CGCTGCTGGC CTGCGTCGGG GCCGCCAACG CGCTGGCCAG CCCTCGGCGG
CTGGTGCGCA GCATGCCCGC CGCGCTGTAC GAGGTGAGCG TGGCCGTGGT GGTGGCGCTG
ACCGTCGCGC CGCAGCTGGT CACCAGTACC CAACGGGTCC ACCGGGCCCG GCAGCTGCGC
GGCGACACCT CGAAGCGGCC CGGGCACGTG CTGCGGCGCG TGGTGGCGCC GGTGCTGCAC
GACGCCCTGG ACCGGTCGCT GTCGCTGGCG GCGGCGATGG ACTGCCGGGG CTATGGACGC
AAGACCGGCA TCCCGAAACC GGCCCGGCGG GCCACGGCGG CGCTGCTGTT GCTGGGGCTG
TTGGGTTTGT GCGTCGGGGC ATACGGGCTG CTGGGCGCGC AGACCTCCCC GACGGCCGCG
GCCGCGCTGC TGACCGGCGG CGCGGTGCTC GCGGGCGGCG GCATCGTGCT GGCGGCCCGG
CGGGTGCCGC GCACCCGCTA CCGTCCAGAC CCGTTCGGGG TTCGGGAGTG GACGGTCGTG
GCCAGCGGGC TGGCCGTGCT CGCGGCGATC ATCGTTTCCG AGGTGCTGTC ACCGGCCGGC
CTCATCGCCG AGACCCAACC GGCTCAGCTG CCGCCGCTGC CGTTGCTGGC GGCACTCGGC
ATCCTCATCG GACTCGTCCC GGCGGCCGCG GCCCCGGCAA CACGCACCGT CGTGACGGCG
ACGGTGAAAC GCGAGGTGGC GGCATGA
 
Protein sequence
MTRAGRLHPV AWWVWAVCLA TAASRVTNPW LLLMIMAVAG YVVTARRGDE PWSNAYRVFL 
MIGFIAIGIR LVFHILLGGV QGPTVLFELP SLTLPEWTQG IRIGGPVTLE GVLFAVYDGL
RLATLLACVG AANALASPRR LVRSMPAALY EVSVAVVVAL TVAPQLVTST QRVHRARQLR
GDTSKRPGHV LRRVVAPVLH DALDRSLSLA AAMDCRGYGR KTGIPKPARR ATAALLLLGL
LGLCVGAYGL LGAQTSPTAA AALLTGGAVL AGGGIVLAAR RVPRTRYRPD PFGVREWTVV
ASGLAVLAAI IVSEVLSPAG LIAETQPAQL PPLPLLAALG ILIGLVPAAA APATRTVVTA
TVKREVAA