| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3073 |
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| Symbol | |
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| ID | 8884272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3242398 |
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| End bp | 3244173 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | Glycoside hydrolase family 20, catalytic core |
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| Protein accession | YP_003511837 |
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| Protein GI | 291300559 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.221724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.79825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGC CGACCGAGCT CGTCCTGCTG CCCCGCCCCC GCCACCTCGA CGTCACCGGC
GACGGTCCGC CCACCACCAC CGAAGCCGTC GAGCACCAGG CCACCGACCT CGAACCGCAG
GGCTTCGAAC TCCACATCAG CGACACGACG ATCAACCTGC GCTACCGCGA CGACGCCGGA
CTGCGCTACG GCCGCGCCAC CCTCGCCCAG CTGCGCGCCC AGTTCCCCGA CCGGCTGCCC
GCCCTGTCCA TCAAGGACTG GCCCGACTTC GCCACCCGCG GCTACATGCT CGACGTCAGC
CGAGGCCGGG TCCCCACCCG CGACACCCTC GAACGCATCG TCGGCCTGCT GGAACTGCTG
CGCGTCAACC ACTTCCAGCT CTACACCGAG CACACCTTCG CCTACACGGC CCACGAAACC
GTGTGGCGCG ACGCCAGCCC CATGACCCCC GACGACATCC GCTGGCTCGA CGAACGCTGC
ACCGAAGCCG GTATCGAACT GGCCGCCAAC CAGAACTGCT TCGGCCACTT CGAACACTGG
CTCAAACACG ACGCCTACCG CGACCGCGCC GAACTGGCCG AGGGCTTCGA ACTGATGGGC
CGCCACCGCC CCGCCACCAC CCTCGCCCCC ACACAGGACA ACGCCGACTT CGCGCTGGAC
CTGGTCCGCG AACTGGTCCC CAACTTCTCC AGCCGCCGCG TCAACATCGG CTGCGACGAA
ACCTGGGAAC TGGGCCGGGG CGTATCGAAG GCGGCGGCCG ACGCCAAAGG CAAGGGCCGG
GTCTACCTGG AACACCTCCA CCGCCTGGTC AACCCGCTGA TCGCCGACGG CCTCGACGTC
CAGTTCTGGG GCGACATCAT CGCCAACCAC CCCGAACTGG CCACCGAACT GCCACAAGGC
GCCACCGCCG TGGCCTGGTG GTACGAGGCC CCCTGGGACC CCGAAGAGCA GGAACGACTG
CTGTGGGAAG TCGGCGACCG TTTCCTGGAC GCCGGGGTCG ACCTCAGCAA GAAACTGGGC
GGCTTCGCGG GCGAGGCCGC ACCCTTCCTC GAATCCAGCT ACCCACTGTG GGTCGCACCC
GGCACCGGCA CCTGGCGTTC CCTGCTGGGC CGACTCCGCA CCGCTTACGG CAACATGCTC
GACACCGTCA ACGTCGGCCT GTCCGGCGGC GTCGAAGGCG TCCTCATCAC CGACTGGGGC
GACGGCGGCC ACCCGCAACC CCCCTCAGTC ACCTTCCCGC CCCTGGCCTA CGGCGCCGCA
CTCTCCTGGT GCCGCGACGC CAACCACGAC CTCAACGTCC CCGCCGTCCT CGACCACTTC
GTCTTCCCCG GCACCAACAT CGGCGCGGCA CTCGAAGCCC TGGGCCACCT CAACGACCGC
ACCGGCCAGA TCGCCTTCAA CTCCAGCCCC CTCCAACTGG CCCTGGAACC CAACGCCCAC
CACGTCGGAG TAGGCGACCC GGACCCGAAG GCCCTGGCGG GAGTCGTCGA CGACATCGAC
GCCCTCATCG CCACCGTCAA CTCCGGCAGC GGCGCCTTCG GCGACCACGA GATCGTCCAA
AACGAACTCA CCGCCGCCGC CCGCCAAGCC CGCCATGGAG CCTGGCGCCT ACTGCGCCAA
GCCGGAGCCC CGGCCCCCGA CACCGCCGCC ATGCGCGCCG ACCTGGCCGA AACCACCGAA
CTCCACCGTC GAGCCTGGCT CTCCCGCGCC CGACCGGGTG GCATGGAAAC CTGGATGACA
ACCCTGACAG CGCTGGCCAA GACCTACGAC TCCTGA
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| Protein sequence | MIAPTELVLL PRPRHLDVTG DGPPTTTEAV EHQATDLEPQ GFELHISDTT INLRYRDDAG
LRYGRATLAQ LRAQFPDRLP ALSIKDWPDF ATRGYMLDVS RGRVPTRDTL ERIVGLLELL
RVNHFQLYTE HTFAYTAHET VWRDASPMTP DDIRWLDERC TEAGIELAAN QNCFGHFEHW
LKHDAYRDRA ELAEGFELMG RHRPATTLAP TQDNADFALD LVRELVPNFS SRRVNIGCDE
TWELGRGVSK AAADAKGKGR VYLEHLHRLV NPLIADGLDV QFWGDIIANH PELATELPQG
ATAVAWWYEA PWDPEEQERL LWEVGDRFLD AGVDLSKKLG GFAGEAAPFL ESSYPLWVAP
GTGTWRSLLG RLRTAYGNML DTVNVGLSGG VEGVLITDWG DGGHPQPPSV TFPPLAYGAA
LSWCRDANHD LNVPAVLDHF VFPGTNIGAA LEALGHLNDR TGQIAFNSSP LQLALEPNAH
HVGVGDPDPK ALAGVVDDID ALIATVNSGS GAFGDHEIVQ NELTAAARQA RHGAWRLLRQ
AGAPAPDTAA MRADLAETTE LHRRAWLSRA RPGGMETWMT TLTALAKTYD S
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