| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3057 |
|---|
| Symbol | |
|---|
| ID | 8884256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3222136 |
|---|
| End bp | 3224619 |
|---|
| Gene Length | 2484 bp |
|---|
| Protein Length | 827 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | phenylalanyl-tRNA synthetase subunit beta |
|---|
| Protein accession | YP_003511821 |
|---|
| Protein GI | 291300543 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.719284 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTCC CACTGTCCTG GCTGCGCGAG TACGTCGCGC TGCCGCAAGA CCTGCCGATC
GCCGACCTCG ACGCCGCGTT CGTCCAGTGC GGCCTGGAAG TCGACACCGT GGAAGACCTG
CGCGACAACG TGACCGGCCC GCTCGTGGTC GGCACCGTCG CGTCCTTCGA GGTGCTCACC
GACTTCAAGA AACCCATCCG CTACTGCCAG GTCGACGTCG GTGAACCCGA ACCGCGCGGC
ATCATCTGCG GTGCCAGCAA CTTCGCCGAG GGCGACCGGG TCGTCGTCGC GCTGCCCGGC
GCGGTACTGC CGGGCGGCTT CGCGATCAGC GCCCGCAAGA CCTACGGCCA CGTGTCCGAC
GGCATGATCG CCTCGGCCCG CGAACTGGGC CTGGGCGAGG ACCACTCAGG CATCATGGTG
CTGCCCGACA GCGCCGAGGC CCCCAACGGC GCCGACGCGC GCCCGGTGAT CGGCCTGGAC
GAGGTGATCT TCGAACTCGA ACTCACCCCC GACATGAGCC ACTGCTTCTC CATGCGCGGC
ATCGCCCGCG AGGTCGCCCA CCGGCTCGGC GTCGGCTTCA CCGACCCGGC CGGTCTGACC
ACCGAACCGG CGGCCACCGC CGACGGCCCG CACCCGCTGC GCGTCGACGA CCCGCTGGGC
TGCGACCGCT TCGCCACCCG CGCCGTCCGC GGCCTCGACC CCGCCGCGGC CAGTCCGGAA
TGGCTGCGCC GCCGCCTCAT CCACGCGGGG ATGCGTCCCA TCAGTCTGGC CGTGGACGTC
ACCAACTACC TGATGCTGGA ACTCGGCCAG CCCATGCACG CCTGGGACCT GGCCACCCTC
AAGGGAACCC TGGTGGTGCG CCGCGCCGCC GCCGGCGAGA AACTGACCAC ACTCGACGAC
GTCGAACGGT CCCTGGACGC CGAGGACCTC GTCATCTGCG ACGACACCGG TCCACTGTCC
CTGGCCGGAA TCATGGGCGG CGAAACCAGC GAGATCTCGG ACTCCACAAC GGACGTCCTC
ATGGAGGCGG CCCACTGGGA CCCGACCACC ATGGCCCGCA CCGGCCGCCG CCACCGGCTG
TCCAGTGAGG CCGGAAAACG CTTCGAACGC GGCGTCGACC CCGCACTGTG CCGCGTCGCG
GTCCAGCGCG CCATCGACCT GCTCGTCGAA TACGGCGGCG GCACCGTCGA CGCGTCGGTC
GGCGACATCG ACAACCGCCG CCCCACCGCG ACGATCCGCC TCGCCGCCGA CCTACCGTCC
CGCATCGCGG GCGTCAGCTA CGACACCACC CGGGTCGGCG CGGCGCTGGA CGCCTGCGGC
TGCACCTGGA CCGCCGAAGC CGACACCCTC ACGGTGACGC CACCCAGCTG GCGGCCCGAC
ATGACCGACC AGGCCGACGT CGTCGAAGAG GTCATCCGCC TCGACGGCTA CGACAAGGTC
CCCTCGGTCC TGCCCGCGGC CCCACCCGGC CGCGGCCTCA CCCCGACCCA ACGCCGACGC
CGCCACATCG GCCGCGCCCT CGCGTCAGCC GGGTACGTCG AAACCCTCAC CTACCCGTTC
GGCGACCCGA CGGTCTTCGA CGCCCTCGGC CTCCCCGCCG ACGACCCGCG CCGCCAGGTC
CTCACCCTGG CCAACCCGAT CGTCGACGCG GAACCGGCAC TGCGCACCAC CCTCATCCCG
GGCCTCCTCA AGGCCCTCAA GGTGAACGTG GACCGCGGCA TCCGCGATGT CGGCCTCTTC
GAGACCGGCC TGGTCTTCAA CCCCCGCCCG GGCTGGGAAG ACCAACCGCT CCCACAACTC
CCGGTCGACC GCCGACCGAC CGCCGCCGAA CTGGCGGTGG CCGACGCGCT CCGCCCACAC
CAACCCCAAC ACCTCGCCAC GGTCCGCTGC GGCCACATCG AGAGCGACGG CTGGTGGGGC
CCAGGCCGCT TGGGAGACTG GAGCGACGCC ATAGCGGCGG CCCGCACCAT CGCCTCGGCC
TCCGGCGTCG AACTCGAAGT CCGCCAAGCC CAACACGCCC CCTGGCACCC GGGCCGCTGC
GCCGAACTGC TCCACAACGA CACCGTCGTG GGCCACGCGG GCGAACTCCA CCCGAGCGTC
TGCGACGCCC TGGAGGTACC CCGCCGCACC TGCGCGGTCG AGATCAACCT CGACGCCATC
GGCTTCCCCG AGGTCCCACC AGGCCCATCG ATCTCCCACT ACCCGGTGGC CCTGATCGAC
GTCGCGGTGG TCGTCGACGC CACCACCCCG GCAGCCCAAG TGGCCAGCGC CCTCTCCGAA
GGCGCGGGTG ACCTCCTGGA GGACATCCGC CTGTTCGACG TCTTCTCCGG CGAACAACTC
GGCGAGAACC GCAAATCGCT GGCCTACAAA CTCACCTTCC GCGCCCCGGA CCGCACCCTC
ACCGCGGACG AGACGGTCGA GGCCCGCGAC CGAGCAGTCG CCCTCGCCGC CGACCGCCAC
GGCGCGGTAC TGCGCGGGGC GTGA
|
|---|
| Protein sequence | MRVPLSWLRE YVALPQDLPI ADLDAAFVQC GLEVDTVEDL RDNVTGPLVV GTVASFEVLT
DFKKPIRYCQ VDVGEPEPRG IICGASNFAE GDRVVVALPG AVLPGGFAIS ARKTYGHVSD
GMIASARELG LGEDHSGIMV LPDSAEAPNG ADARPVIGLD EVIFELELTP DMSHCFSMRG
IAREVAHRLG VGFTDPAGLT TEPAATADGP HPLRVDDPLG CDRFATRAVR GLDPAAASPE
WLRRRLIHAG MRPISLAVDV TNYLMLELGQ PMHAWDLATL KGTLVVRRAA AGEKLTTLDD
VERSLDAEDL VICDDTGPLS LAGIMGGETS EISDSTTDVL MEAAHWDPTT MARTGRRHRL
SSEAGKRFER GVDPALCRVA VQRAIDLLVE YGGGTVDASV GDIDNRRPTA TIRLAADLPS
RIAGVSYDTT RVGAALDACG CTWTAEADTL TVTPPSWRPD MTDQADVVEE VIRLDGYDKV
PSVLPAAPPG RGLTPTQRRR RHIGRALASA GYVETLTYPF GDPTVFDALG LPADDPRRQV
LTLANPIVDA EPALRTTLIP GLLKALKVNV DRGIRDVGLF ETGLVFNPRP GWEDQPLPQL
PVDRRPTAAE LAVADALRPH QPQHLATVRC GHIESDGWWG PGRLGDWSDA IAAARTIASA
SGVELEVRQA QHAPWHPGRC AELLHNDTVV GHAGELHPSV CDALEVPRRT CAVEINLDAI
GFPEVPPGPS ISHYPVALID VAVVVDATTP AAQVASALSE GAGDLLEDIR LFDVFSGEQL
GENRKSLAYK LTFRAPDRTL TADETVEARD RAVALAADRH GAVLRGA
|
|---|
| |