Gene Snas_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3028 
Symbol 
ID8884227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3192417 
End bp3192974 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511792 
Protein GI291300514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.514475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGTCG TCGCTGGCCA GCTGGCGGCA CTGACGGTGA CGGTATCGTC GCCGGACGCG 
AGGATGCGTG CCACCGTCAC GGCCGGAAAG CCGCGTTCGT TCGGGTTCCG CCCCAACACC
TACCGCTTCT ACACCGAGGA TCGGCTGGGG CACCAGCTCG CCCGGCTGGC CACCCTGGCT
TACATCGGAC ACCAGCGCGG CGTGGACCGG ATCCACGCCG AGAACGACAT GACGGTCATC
CGCGACCCCC GACAGGCCCG CGATCCCGCC GAGGCAACCT TCGTCGAACG GTCCAACAGC
ATCACCGTCG CGGGCGTCGG GGCCCGGAAA ATGGTTCGCT TCAAGACAAC CGGCATGCTG
AACTGGCAGT GCCGCATCGC GGAGGGGACG GTGCGGCGAC TGTCCGAGAA GGAGTTCGTT
TCGGAGGTGT CGTTGGCCGT CAACGACGTG CTCGGCAAGA CCCACAGCAT CGCCATGCTG
CTCAAGGACG AGTACCGCGG CCGGGTGCTG TCGCACGACG TCCGGGAGAG ACTCATCGCC
GAACTGTCGG CCGCTTAG
 
Protein sequence
MGVVAGQLAA LTVTVSSPDA RMRATVTAGK PRSFGFRPNT YRFYTEDRLG HQLARLATLA 
YIGHQRGVDR IHAENDMTVI RDPRQARDPA EATFVERSNS ITVAGVGARK MVRFKTTGML
NWQCRIAEGT VRRLSEKEFV SEVSLAVNDV LGKTHSIAML LKDEYRGRVL SHDVRERLIA
ELSAA