Gene Snas_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3022 
Symbol 
ID8884221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3186615 
End bp3187934 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511786 
Protein GI291300508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0324251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.290235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA CCGCCGAGAC GATACGGCGG TGGTGGCGGG CCTTCACCGC CTGGCGCCGG 
GACCGTCCAT TCTGGGGCGG AGTGCTCACC ATCGCCGGAG CGCTGGAACT GCTCGCCCTG
ACCGCCGCAC CGCTGCAGAT CATGCTGATC CGGGGCCTGG CCGGGATCGG CACCCTCGTC
ATCGCCGCCA TGCTGATCGC GCTGGCGATC ATCAGTTGGA CCCACGGCCA CCTGCGGGTG
ATCTGCGGGG TGTTCATCGT GATCCTCGGG CTGGCGTCCT TCGCGGTGTC CAACCTGGGC
GGATTCTTCA TCGGACTGCT GCTGGCCCTT GTGGGCGGTT CGCTGATATT CGCCTGGCAG
CCCGGGAAAC CACCCGACGC CGACGAGACC GCCACCGAGG AGATCCCGCC GGTACCCGCG
GCGGAGACCG CCGAGGAGTC CGACCGCACC ACCGCCGACA TGACGGTCCG CGCACCATCC
CCTGTGATCA CTCCCGCCGG CCGCGCCCCC TCCCGGCCCC GGCTGATCCT GCGCGTCGCC
AGCGTCCTGG CGGTCGTGGC CGCCGCGTTC GTCGCCGTCC CGCAGGCCTC GGCGCAGCAG
ACCAGACCCA GCGCCGACCC GACCTGGCCC TGCCCCGACT GGCCCTGGCC GTGGCCGTGC
GACGACTCGT CCGAACCGGA CGATCCCGGT GACGACGACC CTGACGACCC CGGCGATGAC
GAGCCCGACA AGCCGGGCGA CGACGACCCG GACAAACCCG AGAAGCCCGA CGAGGAATGC
GACGAGTCGA AGCTGCCCGC CAAGCCCCCG AAGCTGGGAA CCGAGGCCGC GAAGAAGACC
GCCAAGGCGC TGGCGGCCTG CCTGGCCCAG CCCGGTTCCG GCGACGCCGA GGGCCGCGAC
CTGCCCACCG CCTCGACGTA CCACCCGCTG CTCAACGCCG ACGTCATGAC CATGACCGGC
ATGAACTCCG GCGGTGCCGT CGACGTGCCC ACCGCCGACG GGAAACAGCG CGCGCTGGAG
TTCACCATGG ACACCCTCGA CCTGTACAAC ATGGACCAGG CGTCTGGGAT CGAGGGCACG
AAGGCCCAGC TCCACGTCAT CAACATGGGC TCCTCGGCGG TGCTGTCGGG CGGCGTCCGG
CTCTACGTGC AACGCATGGA GGGGCTGATC TTCGGCGTGG TGCCGATCGT GATCACCGCC
GACCTGCCGC TGCCGCCGAT ACCGGTGCCG TACCTGGTCG TCACCGAGGC CAAGGTGCAG
ACCGCCTACG TGCGGGCCGA CCGCGTCGAC CTGCCCGATC TGGAGGAACC GACCCGCTGA
 
Protein sequence
MSTTAETIRR WWRAFTAWRR DRPFWGGVLT IAGALELLAL TAAPLQIMLI RGLAGIGTLV 
IAAMLIALAI ISWTHGHLRV ICGVFIVILG LASFAVSNLG GFFIGLLLAL VGGSLIFAWQ
PGKPPDADET ATEEIPPVPA AETAEESDRT TADMTVRAPS PVITPAGRAP SRPRLILRVA
SVLAVVAAAF VAVPQASAQQ TRPSADPTWP CPDWPWPWPC DDSSEPDDPG DDDPDDPGDD
EPDKPGDDDP DKPEKPDEEC DESKLPAKPP KLGTEAAKKT AKALAACLAQ PGSGDAEGRD
LPTASTYHPL LNADVMTMTG MNSGGAVDVP TADGKQRALE FTMDTLDLYN MDQASGIEGT
KAQLHVINMG SSAVLSGGVR LYVQRMEGLI FGVVPIVITA DLPLPPIPVP YLVVTEAKVQ
TAYVRADRVD LPDLEEPTR