| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3020 |
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| Symbol | |
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| ID | 8884219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 3185301 |
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| End bp | 3185942 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003511784 |
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| Protein GI | 291300506 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000370253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.25528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGACG GTGGGTTTGT CAAGACCGGC GACATGGATT CCGTCGACGG CCGAAAAGGA
CGCTGGCAGG CGCACCGGCA GGCCCGGCGG CTGGAGCTGG TACAGGCCGC GGTACGTGCC
ATTCACCGAA ATGGACCGCA CATAAACATG AACGACGTGG CCGCCGCCGC GAAGGTGACC
AAACCCGTCC TCTACCGGCA CTTCGCCGAC CAGCGCGAGC TGTACCACGC GGTGGGCCAG
TACGCCGCCG AGTGGCTGGT GGCCTGGCTG GCCCAGCACC TGGAACCCGA GACCGAACCC
ACCGAGGTCA TCGCCACCGT CATCGACGCG TATCTGGGCG CGGTGGAGAC CGAACCGGTG
CTGTACCGCT TCGTCATCCG CTACGCCTTC GCCGACGAGG CCAACGCCGT GGACGGCTAC
CGCGACATCG TGGTGCGGCA TGTCGACGAG ATGCTGCGGG CCCGGCTCAA GGCGGCGGGA
ATGGACGACT CCGCCTGCCA CGCCTGGGCC CAGGGCATCG TCGGCATGGT GCAAAGCGTC
GGCGAATGGT GGCTGGACCG CCCCGACGCG GCCACCCGTC CCCAGCTCAC CCAGCAGCTC
ACCGCCCTGA TCTGGGGCGG ACTGTCGCAG GCGTTTCCCT AA
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| Protein sequence | MADGGFVKTG DMDSVDGRKG RWQAHRQARR LELVQAAVRA IHRNGPHINM NDVAAAAKVT
KPVLYRHFAD QRELYHAVGQ YAAEWLVAWL AQHLEPETEP TEVIATVIDA YLGAVETEPV
LYRFVIRYAF ADEANAVDGY RDIVVRHVDE MLRARLKAAG MDDSACHAWA QGIVGMVQSV
GEWWLDRPDA ATRPQLTQQL TALIWGGLSQ AFP
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