Gene Snas_2990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2990 
Symbol 
ID8884189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3158343 
End bp3159299 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content66% 
IMG OID 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_003511757 
Protein GI291300479 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.718381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0201833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA GAAACCATCG ATCCTTCGCG CTCAGCCGCC GCAGCCTGGT GAAATGGGGT 
GGCGCCGCGG CACTGGCCGC CTCGATCCCC GTCACCATCG CCGCCGCCAC GGCCGGAGCC
GAACCGACCG GGAAGAGCGT GCGACTGCGC TGGCTGGGCA CCAACTCCTG GGAGTTCACC
ACCGAGGAGA CCACCGTCCT CATCGACCCG TGGGTGAGCC GCTTTCCCAC CGGCGCCTAC
ACCGAGGCGG GCGCCAACCC GGAGACGAAA ATCGAGGTCC ATGAGGACGT CATCGACGAG
CACCTCCCCA AAGCCGACAC CATCCTCGTC ACCCACGGCC ACTGGGACCA CATCGCCGAC
GTCCCGTACA TCGCGAAGAA GACCGGCGCC ACCGTCATCG GCACCGAGAC CCACCTGAAC
CTGTTGCGCG CCATGGACGC CCCCGAGGAA CAGCTCGGAC AGGTCGTCGG CGGCGAGTTC
TACCAGTTCA AGGGCTGCAC GGTGGAGGTG TTCAAGTCCA CGCACTCGGC CAAGGGTGAC
CACAAGAAGA TCGAGTTCGC GGGGACACGC ACCTCGGTTC CCAAGCGGCC CATGAAGATC
AAGCACCTCG TCGAGGGCGG CAGCCTCACC TACCTGCTCG ACTTCGGCGG CGTCTCCTTC
TTCAACGCCG GTTCGGCCAA CTTCCACCAG CACCAGACTG AGGGACTCAC ACCCACCGTC
CTGTTCATAC AGCCCGGCGG CGGCCACACC CCCGACTACG TCGAACGGCT GCTGAAGGCC
ACCGGCTACC CGCGCTACGT GGTGCCGACC CACTGGGACG ACTTCGACAA ACCCCTCACC
GAACCGGCCG TGCCCGGCGG TGACATCGAG ACGCTGCAGA AGCGGGTAGC CAAGGCCAGC
CCCGATTCCG AGTTCGTCCG CATCGACCAC CTGGAGCACC ATGACTTCCA AAGCTGA
 
Protein sequence
MTDRNHRSFA LSRRSLVKWG GAAALAASIP VTIAAATAGA EPTGKSVRLR WLGTNSWEFT 
TEETTVLIDP WVSRFPTGAY TEAGANPETK IEVHEDVIDE HLPKADTILV THGHWDHIAD
VPYIAKKTGA TVIGTETHLN LLRAMDAPEE QLGQVVGGEF YQFKGCTVEV FKSTHSAKGD
HKKIEFAGTR TSVPKRPMKI KHLVEGGSLT YLLDFGGVSF FNAGSANFHQ HQTEGLTPTV
LFIQPGGGHT PDYVERLLKA TGYPRYVVPT HWDDFDKPLT EPAVPGGDIE TLQKRVAKAS
PDSEFVRIDH LEHHDFQS