| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2988 |
|---|
| Symbol | |
|---|
| ID | 8884187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3156976 |
|---|
| End bp | 3157836 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | Beta-lactamase class A-like protein |
|---|
| Protein accession | YP_003511755 |
|---|
| Protein GI | 291300477 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.599854 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0212665 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACG ACCTGTTCGA CCCGCTGGAC GCCGAGGTGT ACGCGCACAT CCGCGACATC
GACGACGGTC GCGCCCTCGG TGTCCGCGAG ACGACCCCGG TCATCCTCGT GTCGGTCATC
AAGCTGTTCA TCGCCTGGGA GTTTCGCTGC CGGGTCGCCG AGGGCACGAT CGACCCGGCC
ACCCCCATCA GGGTCACCGC CGCCGACCGG CTGGGCGGTA CCGGCACCGC CGGTTTCCGC
CACGACGCCC ATATCGCCGT CGGTGACCTG GCCGGGCTCA TGATGGAGGT CTCCGACAAC
ACCGCCGCCG ACGTCGTCGT CAGGCACATG GGGGCGGGCG GCCTTCGCAG TCTGCCCGCC
CGGCTGGGAC TGACCGGCAC CAGACTGATC GGCTCACCCC GCGCCATCCT GGAGGAGTTG
GCCCGCGACC TCGACGTCAA CGACCTGGAG GCACTGGCCC CGGTGCTGGC CAGCGGCTCG
GTCTCGACCG CGGAACTGCG CGGAACCAGC GTGTGGGATC CGCAGCGCAC GAACGCCTCC
ACGCCCGTCG ACCTGACCCG GTTCCTGGAA CACGTCTGGA ACGGTCCGCC CGAGGTGGCC
CGCGACGTGC GGGGTTGGAT GCGGCGCCAG CTCACCGGAC GGCTGGCCCG GCTGGCACCC
AGCGAGGTCG TCGCGCACGG CCGCTCCGGC TCGCTGCCCG GCTGGCTCAA CGAGGTGGCC
GTATGGGAAT GGCCGGACGG CCGCCGCCAC GCCATCGCCG TGTTCGTGCG CACCAGCCGC
CCCAACTTCC GCGAGGTGGA ACGGGCCATG AGCCTGGCCG CGCTGCGACT CACCGAGAAG
CTCAGCGCCG GAAACGCCTG A
|
|---|
| Protein sequence | MLDDLFDPLD AEVYAHIRDI DDGRALGVRE TTPVILVSVI KLFIAWEFRC RVAEGTIDPA
TPIRVTAADR LGGTGTAGFR HDAHIAVGDL AGLMMEVSDN TAADVVVRHM GAGGLRSLPA
RLGLTGTRLI GSPRAILEEL ARDLDVNDLE ALAPVLASGS VSTAELRGTS VWDPQRTNAS
TPVDLTRFLE HVWNGPPEVA RDVRGWMRRQ LTGRLARLAP SEVVAHGRSG SLPGWLNEVA
VWEWPDGRRH AIAVFVRTSR PNFREVERAM SLAALRLTEK LSAGNA
|
|---|
| |