| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2968 |
|---|
| Symbol | |
|---|
| ID | 8884167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3135440 |
|---|
| End bp | 3136441 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003511736 |
|---|
| Protein GI | 291300458 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.186902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.164864 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATTC TCGTACTCGG CGGCACCGTC TTCCTGTCCA AGGCCGTGGC CGTCCAGGCA
ATGGAACGCG GCCACGACGT GACCGTCGCC GCCCGCGGCG AGAGCGGCCA GCCACCGCAA
GGCGCCCGCT TCGTCAAACT CGACCGCGAC AACCCGGGCG AGGGCCTGGC GGCGCTGTCG
CGGGAGACCT TCGACGCCGT CGTCGACGTC GCCCGCATCC CCGCCCAGGT CAAAGCCGTG
CTCGCGGCAC TGGCCGACCG GGTCGGGCAC TGGAGCTTCG TGTCGACCGT CAACGTCTAC
GCCGACAACT CCATCCCCGG ACAGCACCCC GGCAACGGGA AACTCAACGA CCCGATCGAC
GAGGACAGCA CCGACCCCGA CATCGAGGTG TACGGCGCCA GCAAGGTCGC CTGCGAGAAC
CTGGTGCGAT CCGCGGTGGG GGACAAGGCG TTCATCGCGC GTCCGGGCCT GATCATCGGC
CCCGGCGACC CCGGCTACCG CTTCGGCTAC TGGCCCGACC GGCTCGCCGA GGCCGGTGAG
GTGCTGGCAC CGGGCGACCC GCAGCGGCTG GTGCAGTGGA TCGACGTGCG CGACCACGCC
GAGTGGATCA TCGACGCGGC CGAGAACCAG GTCGTGGGCA CCTTCGACGC GGTGTGCCCG
CCGGTGCCGT TCCAGCGGTT CCTGGACGGC GTCGCCGAGG GCATGGGCAC CACCCCCGAG
TTCACCTGGG TGGACCAGGA CTTCGTCCAG GCCCACGAGA TCAACCCGTG GTCGGGGGAG
CAGTCACTGC CGATGTGGCT GCCGCTGCCC GAATACGCCG GGATGCTGAC CCACGACGTG
ACCGCCTCGG TCGCCGCCGG GATGCGCAAC CGCCCCGTCG CGGAATCCGC CGCCGACTGG
TACGCGTCCA TGAAGGACAA ACCCCGCGAC CCCCAGAAAG GACTCACCCG CGCCAGGGAG
GCCGAGGTGC TGGCCGCCTG GCACGGGCGA GACAAGTCCT AG
|
|---|
| Protein sequence | MRILVLGGTV FLSKAVAVQA MERGHDVTVA ARGESGQPPQ GARFVKLDRD NPGEGLAALS
RETFDAVVDV ARIPAQVKAV LAALADRVGH WSFVSTVNVY ADNSIPGQHP GNGKLNDPID
EDSTDPDIEV YGASKVACEN LVRSAVGDKA FIARPGLIIG PGDPGYRFGY WPDRLAEAGE
VLAPGDPQRL VQWIDVRDHA EWIIDAAENQ VVGTFDAVCP PVPFQRFLDG VAEGMGTTPE
FTWVDQDFVQ AHEINPWSGE QSLPMWLPLP EYAGMLTHDV TASVAAGMRN RPVAESAADW
YASMKDKPRD PQKGLTRARE AEVLAAWHGR DKS
|
|---|
| |