Gene Snas_2952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2952 
Symbol 
ID8884151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3112667 
End bp3113443 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content67% 
IMG OID 
Productglycoside hydrolase family 16 
Protein accessionYP_003511720 
Protein GI291300442 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.123961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0028074 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAGAAAC GAACCTTGGC CATTTCCCTG TCGGTAACCG TCATCCTCGG CGCCACCGCC 
GCGATCGGTT ACCCGGCCCT GGCCGACACC AAGGGCGCCC CGGGCAGCCA GTGGCCCACA
GCCTTCGCCG ACGAGTTCGA CGGCGACGCC ATCGACAAGT CCAAGTGGTC GATCCACTCC
GACGCCGAAG CCGACCAGTG CCTGGGCAAC AAGGGAAACA AGCAGCTGGA GTGGCACACC
TGGGACGCGC TGTCGGTCGC CGACGGCCAG CTGTCCATCA CCGCCCGCCG CGACAACCCG
CAGTCCGGCT ACGAATGGTC CAGCGGCCTC ATCTCCACCG GCCAGGCCTG CGGCCACGAA
CCCGCCAAGC CCTTCAGCGT CAAGGCCGGT GACTACGTCG AGACCCGGCT CCAGCTGCCC
GACGAGGCCG GTTTCTGGCC GTCGACCTGG ACCTGGAACG GCAACGGCTC CAACGAACAG
GACACCTACG AGTACTACAG CGACAACCCG CGGGCGCTGT ACCTGACCAA CCACTTCTCC
GACTCCGGCT GCACCTACAA CGCCAAGGAA GACCTCAACA AGGGCTGGCA CACCATCGGC
CAGCAGCTCG GCCCCGACGA GACCGTCTGG TACCTCGACG GCGAGGAGAT CTGCCGGGGC
GGCCCGCACG AGGGCGAGGG CGCGCTCGTG TTGGACATGT TCGTCTTCGC CGACATCCCG
CCGACCGTGG ACGAGGAATC GATGGCGATC GACTACGTCC GGGTGCACCG CCAGTAG
 
Protein sequence
MKKRTLAISL SVTVILGATA AIGYPALADT KGAPGSQWPT AFADEFDGDA IDKSKWSIHS 
DAEADQCLGN KGNKQLEWHT WDALSVADGQ LSITARRDNP QSGYEWSSGL ISTGQACGHE
PAKPFSVKAG DYVETRLQLP DEAGFWPSTW TWNGNGSNEQ DTYEYYSDNP RALYLTNHFS
DSGCTYNAKE DLNKGWHTIG QQLGPDETVW YLDGEEICRG GPHEGEGALV LDMFVFADIP
PTVDEESMAI DYVRVHRQ