Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2952 |
Symbol | |
ID | 8884151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3112667 |
End bp | 3113443 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | glycoside hydrolase family 16 |
Protein accession | YP_003511720 |
Protein GI | 291300442 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.123961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0028074 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAGAAAC GAACCTTGGC CATTTCCCTG TCGGTAACCG TCATCCTCGG CGCCACCGCC GCGATCGGTT ACCCGGCCCT GGCCGACACC AAGGGCGCCC CGGGCAGCCA GTGGCCCACA GCCTTCGCCG ACGAGTTCGA CGGCGACGCC ATCGACAAGT CCAAGTGGTC GATCCACTCC GACGCCGAAG CCGACCAGTG CCTGGGCAAC AAGGGAAACA AGCAGCTGGA GTGGCACACC TGGGACGCGC TGTCGGTCGC CGACGGCCAG CTGTCCATCA CCGCCCGCCG CGACAACCCG CAGTCCGGCT ACGAATGGTC CAGCGGCCTC ATCTCCACCG GCCAGGCCTG CGGCCACGAA CCCGCCAAGC CCTTCAGCGT CAAGGCCGGT GACTACGTCG AGACCCGGCT CCAGCTGCCC GACGAGGCCG GTTTCTGGCC GTCGACCTGG ACCTGGAACG GCAACGGCTC CAACGAACAG GACACCTACG AGTACTACAG CGACAACCCG CGGGCGCTGT ACCTGACCAA CCACTTCTCC GACTCCGGCT GCACCTACAA CGCCAAGGAA GACCTCAACA AGGGCTGGCA CACCATCGGC CAGCAGCTCG GCCCCGACGA GACCGTCTGG TACCTCGACG GCGAGGAGAT CTGCCGGGGC GGCCCGCACG AGGGCGAGGG CGCGCTCGTG TTGGACATGT TCGTCTTCGC CGACATCCCG CCGACCGTGG ACGAGGAATC GATGGCGATC GACTACGTCC GGGTGCACCG CCAGTAG
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Protein sequence | MKKRTLAISL SVTVILGATA AIGYPALADT KGAPGSQWPT AFADEFDGDA IDKSKWSIHS DAEADQCLGN KGNKQLEWHT WDALSVADGQ LSITARRDNP QSGYEWSSGL ISTGQACGHE PAKPFSVKAG DYVETRLQLP DEAGFWPSTW TWNGNGSNEQ DTYEYYSDNP RALYLTNHFS DSGCTYNAKE DLNKGWHTIG QQLGPDETVW YLDGEEICRG GPHEGEGALV LDMFVFADIP PTVDEESMAI DYVRVHRQ
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