| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2942 |
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| Symbol | |
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| ID | 8884141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 3092360 |
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| End bp | 3097765 |
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| Gene Length | 5406 bp |
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| Protein Length | 1801 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | hypothetical protein |
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| Protein accession | YP_003511710 |
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| Protein GI | 291300432 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000139053 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCACC GGGACATGTA CGACAAGAAT GATGAACTCG AACAGGTCGT CAATGCGAAG
ATCGAACAAC TTCGACCGCG GTTGCTTGAC CTGAGCCGCA GGAACCCGTT GATCTCCACG
CCTTTGGACA GCAGACGCGG TTCATATGTC CGTGTCGTCG ATGAGTTGCC CGACGAATTG
TTCATACGGC TGTCCAAGGG TGAGCGGCTT CGGTTCGCAG CACTTCCCGA CTTCGAGGAC
GAGCCCGCTG ACGAGCAAAC CGACCAGTTT CAGGAAGAGC TTCACCTGGC GATGGCGAAT
GACGAGGTCT ACGCCGCCGC TATAGATGAC ATCAATCCTG GTGACGATGA CGCTCCGGTG
AAGGAAATCG CTGCCGAACG TCAGTTGCGG GATCGTCTGC GTGAGCGGTT GGGGATGCCG
GACCGAGGCA CTCGGGACAA TCCCAAACTG CAGGAACACG CGAAGTCGTT CGGGATTTCA
CCGCACTATG ATCTGCCAGC ACCGGAGAAC GAGCACACGG ACGGTCGTCA CAATGACGAC
GAGATCCAGA CACTCTTGTT GCCGGAAATC ATGGAGCGCA CGCTCAATCG CATTCGGACC
AAATGCCGTA CGTTTCAACA GGAGACCGGT CTGAACGTAA TGCAGGCGGC CTTTGGATAT
CTGGACTGGT CCGATCCCGA GTCTAAAAAG CGCTGCTACT CCCCGTTGAT CCTGGTTCCC
GTCGAGCTAA CCAAGACGAA CAGTCCCCGA GGCACGCGAT TCCATGTCAC CGGTTCCGGT
GAGGAGGCGT TGCTGAATAT GGTTCTCGAA GAGAAGCTCC GTGGTGAATA TGGAGTACAA
CTCCCCACAT ACGACGGCGG GTCGATTGAG GACTATCTCG AGGAGGTTAC GCGGCAACTG
CCCCGGTCAT TGAGTCCTCA GGTACGGCGT TTCGTCACCT TCGGTGCGTT CCCGTCGGCG
CAACTGGCGA TGTTCCACGA TCTGGATACT CAGCTACGCG ACTTCGCCGC CAATGACGTG
GTCCGACACA TTCTCGGTGG ATCCGATGAC GCGCAGGGGC TCAACCTCTT CGCCGAGGAA
TACCACACCG ATGCCCCGGA AATTGAATCC CAGGTGCCAC TGCTGGTGAC GGACGCGGAT
TCGTCCCAGT TCAGCGCTCT CGTTGACATC GCCAGCGGTA AGAGCCTCGC TGTTGAGGGG
CCACCGGGAA CCGGGAAATC ACAGACCATC GTCAACGCGA TCGCGGCTGC GATGTTGCAG
GGCAAGAAGG TGTTGTTCGT CGCTGAGAAG ACTGCGGCAC TGGACGTCGT GAAGTCGAGG
CTGGATCATC TGGGGTTGGG ACCGTTCGTC CTGCCACTCA CCGCGAGTGG CGCTTCGCGC
CAGCAGGTCC TGGCATCGGT GGCCGAGCGT CTGGACCTCG TCGTCGATGA CAAGCCCTCT
ACGCGGGAAC CACATCTAGA GGAATTCCGT CGGGTCCGGC AGCGCCTCGC CGACTACATC
GCATTGATGC GGAGCGACGT CGCCGGAACC GGCCACACGG TTCACGACGT ATTGGGGCGG
GCTCTGCGAT TGGAGGTGAA CCTTCGCGAC ATCGCGTTGC CCGAGGTCGA AGCCGATTCT
GTCGATCATT TGGCCGCTTC CCGAATCACT GAGATCTTGT CTCTCGCCGC GCAACTCGTC
GATGCCCACA CACATGCTTT CAGTCGCCCG TCGGGTTGGT CAGGTGTTCA CGGGAACCCA
CTCGACAGGT TCACCACCGA CGAGGCACTA CGATCAGCCG GCGACATCGC GAAGCTCTCG
GGCGAGGCCG CCCGACTTCG TGACACCCTC GCTGAGTACG GCGCACCGTA CGAAGCGTCT
CCCGACGATT CTCGTTGGCT GGACGAGACT TTGGTGAGCC TGCTGAAATG CGCCGATCGA
ACCGACACGG CGTTCGCCAT CTGGATCGCG CGGCATGACG CCAGCACGGA AATACGAGAA
CTGCTAGCAC AGTGCGAATC CCTCCGATCG ATGTGCGGGC GGTTGGCAAC GCGGCTCGTG
GCCCCCTTCG ACGCCGACTT GCGACAGCAG TTGCGAACTG TCTTGGCGGT TTGTGAATCC
ACAGGAATGG AGACATTGGA TCGCGCAAGC CTCGAATCCC ACATAGCTCA GCAGACCGCC
ATTCTGTCCA ACGGTGAAAA TGCGTTGCGC CTGCTCACTA CGCTGGTCTC ACACGTTCCT
GGTCTCGCAG ACTGCGGCTT GACGGCTGTA GCCGCCGCCG CGACGCTGAT TCGTCAGACT
CCTCGTGACG CGCTGCTATT GCGCAGACCG GATATGGCTG ACCCTCGAGC CACTCGGACC
CTTCAGAGTG GAGTCGAGCA TCTTCGCCGA CTGCGACAGC GACGCGCCGA ACTGGACGTT
CGCTTCGACG TCATGCGTCT CCCCGACGCG GACATGTTGG GTCACGAAGC GGAGATCCTC
GCCAAAGCGG GCATGTTCTC GGGCTTGAGC AGCGGGTACC GCCGTGCCAA GCGCCGCTGG
CTTGATCTAC GCCGCCAAAC CGATGCATTC AAGCGGGCTG ACGCAGCCCG GGATCTCAAG
CTGCTCACCG ATTGGAGACG TGACGCGACA GCTTTCGCCG ATGATCGCGA GTTGAAAGCA
TTGCTAGCCT CGGACTTCAC CGGTGTGGAC ACCGATCTGA GCATCATCGA ATCGCTCACA
ACCTACCTCG CCGGGGTCGA GAACCAGTTC GCCGCACTCG ATAGCCGCTC CCTGCGTTCG
CTACTCCATA ATGGTGAAAT AGACGTCCTG GCCAGCCTGG CACAGGTCGA ACTCGACGGA
TTTCCAGGCT CCGTCACGGA CCTGGATTCT GAATTGCGGC TGCGGCGTGA AAAACTGCGA
CTGTTGGAGG CCGGGCTCCA ACAAATTCTC GCGCTACACC CGCGCCTAAC CAATCCGAAC
GCGACCTCTC CACACCAACT TTTGGAACTG CGCGACATCC TCGACTCGTA CGATTCCGGT
TTGAGAGCGA TAGCAGAACA CCCCCTGCGA GAGCCGCTTG GTCGTCGGTG GTGTGACGAA
CAGCTGCGCC ACGAAGACTT GGCCGCCGAG CTCGACTTCG CCGAGCTGAT CTCTCGCCGA
CCCGACTGGA TTAATTTCTA CTGCACGGTG ATCGAGCATC GGGACCTCGA CAAGATCGCG
CGTCTGGTCA AGGCGGATAC CGCACCAGCC GTCTTCGCGA AGATGAGGGG ACTGACCGAC
TTGGTGGAGC TTCCATCACG TCCCAAGGAC GAGCTCGTCG TCTATGCGGA ACTCACACAA
CAATTCGAAC ACATGGCGAA TGATCGGTCC GGGCTGGTGC AACACGCTCA GGCACACACC
TGCTCCGAGC GGGTGCGGGC TTTCGGTTTC GGCGCCGAAC TCGACGCGAT TCTGGAGCAC
GAACTAGGTA TCGACAGACT CCCCGGGGTC ATCGAAGCCC GGATCTATCG GTCGCTGGCC
AGGTGGGTCC ATGACCAGCA CGGTGAGATT CTGGCAGCAT TTCGACACGA TGGGCTCGAC
AAGCTGCGAC GGCGGTTGGC CACGTTGGAC CGGGCCATCA TTGCCGAGTC CGCTGGATCC
GCGCGCCGGA GTCTGTTCCA CAACGCCGCT CCGCCCACGG GTATCGGTTC GGGCTTGAAA
TCCAGCTACA CAGAGATCGC TTTGCTCAAT CATGAGGTAA GCAAGTCGAA GCGCCACATC
CCCATTCGAG ATCTGACGCG TCGCGCTGGG GCAGCACTCC TCGAACTGAA ACCGTGCTGG
ATGATGTCAC CGTTGGCCGT CGCCCAATAT CTCGACGACC CTAACCTCCA CTTTGACCTG
TGTGTGATCG ACGAAGCCTC TCAGATGACT CCCGAGCACG CTGTCGGCGC GCTGGCTCGG
TCATCCCAGG CGGTCATCGT CGGTGACACT AATCAGTTGC CGCCGTCGAG CTTCTTCCGA
AAGATGGTCT CCGAGGGCGA CGAGAACGAG GAGGACATCG TCGAGGATTC CATATTGGAG
TTGGCGAATT CCGCATTCCG GCCGTCACGG CGACTGCGCT GGCATTACCG GTCCCGGCAT
TCCGGGTTGA TCGCGTTCTC CAACCATCAC GTTTACGACG ACGACCTGAT CGTATTCCCA
TCCGCCGCCG AGGGCCTTTC GAACATGGGT GTCTCGCTGG TCGCGGTTGA TGGTTCCTAT
CGGGCGGGAA CCAATTCCGC CGAAGCTGAC GTCATGACAA ACGCGGTGTT GCGGTTCATG
CATGAACACC CCGGTCGGTC ACTCGGCGTC GTTACGCTGA ACCAGAAACA GCGTGACCTT
GTCGAGGAGA AGATCGATCA TGCCCTGAAC CACGACGCTC GGGCGCTCGC ATACGTCCGC
AAATGGGAAC GTGATCGAGA CGGGCTGGAA AGTTTCTTCG TGAAGAATCT GGAGAACGTC
CAGGGCGACG AACGCGACGT GATTTTTATC GGGACGGTCT ACGGCCCGGA TTCGCAAACT
GGGCGGGTTT ACCAACGGTT CGGACCCATC AACGGTGTCG CTGGAAAGCG ACGGCTCAAC
GTCCTCTTCT CTCGCGCGAA GAAACAGATC GTCACGTTCT CGTCCATGTC TGCGGCTGAT
ATCTCCGCAC AGGCCGATAC CAATCCGGGT GCGAACATGC TCAAGCGCTG GCTCGATTAT
TCCAAGACCA ATCGATTCGA GACCGGAGAG ATTCTTGATC GTGAACCCGA TTCCGACTTC
GAATACCATA TCGCCGAACA GATCCGAGCT CTCGGCTGTG AAGCCGTGCC ACAAGTCGGA
GTCGGTGGGT TTCGCATTGA TATCGGCGTC AAACACCCGC AATGGCCACA CGGCTTTCTG
CTCGGGGTGG AGTGCGACGG CGCGAACTAT CGTTCTGCCA AGTCCGCTCG CGATCGTGAT
CGGCTCCGTC AAGAGGTCTT GGAGGGGCTT GGGTGGACAC TTCACCGGGT GTGGTCCACG
CACTGGTTCG ACGACCCTGC CACAGAGGTC CACAAGCTTC GTGTACAGAT CGAGCAACGA
TTGCGTGAGG TTCAATCGAC CGACGGCGCC ACGTCGGCTG ACAATGCGAC AACGTTTAAG
GACGCCGTCG CGGAAGAATT GGCACCAGAG TTGGCTCCAT TGATGCCGAC CACCACAAAT
CTCGCCAACC GGGTCGATGC CGATCAAGTC GCGATCGGCA GCCGCATTCG CCTGCGATTC
CTTGACGGTA ATCGTGAGGT TCACGAGGGC ACCATCGCTG AGGACGGGGA CGGTCCAACC
CATATTCCCG CCAACTCACC GCTGGGAGTG GCAATCATAG GGGCCGAAGT CGGTGACGTC
GTTCCGTTGC TCGTGGACTC GCGCATACGT AGATTCGAGG TTGTGGCTGT CTGGACCCGC
ACCTGA
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| Protein sequence | MSHRDMYDKN DELEQVVNAK IEQLRPRLLD LSRRNPLIST PLDSRRGSYV RVVDELPDEL
FIRLSKGERL RFAALPDFED EPADEQTDQF QEELHLAMAN DEVYAAAIDD INPGDDDAPV
KEIAAERQLR DRLRERLGMP DRGTRDNPKL QEHAKSFGIS PHYDLPAPEN EHTDGRHNDD
EIQTLLLPEI MERTLNRIRT KCRTFQQETG LNVMQAAFGY LDWSDPESKK RCYSPLILVP
VELTKTNSPR GTRFHVTGSG EEALLNMVLE EKLRGEYGVQ LPTYDGGSIE DYLEEVTRQL
PRSLSPQVRR FVTFGAFPSA QLAMFHDLDT QLRDFAANDV VRHILGGSDD AQGLNLFAEE
YHTDAPEIES QVPLLVTDAD SSQFSALVDI ASGKSLAVEG PPGTGKSQTI VNAIAAAMLQ
GKKVLFVAEK TAALDVVKSR LDHLGLGPFV LPLTASGASR QQVLASVAER LDLVVDDKPS
TREPHLEEFR RVRQRLADYI ALMRSDVAGT GHTVHDVLGR ALRLEVNLRD IALPEVEADS
VDHLAASRIT EILSLAAQLV DAHTHAFSRP SGWSGVHGNP LDRFTTDEAL RSAGDIAKLS
GEAARLRDTL AEYGAPYEAS PDDSRWLDET LVSLLKCADR TDTAFAIWIA RHDASTEIRE
LLAQCESLRS MCGRLATRLV APFDADLRQQ LRTVLAVCES TGMETLDRAS LESHIAQQTA
ILSNGENALR LLTTLVSHVP GLADCGLTAV AAAATLIRQT PRDALLLRRP DMADPRATRT
LQSGVEHLRR LRQRRAELDV RFDVMRLPDA DMLGHEAEIL AKAGMFSGLS SGYRRAKRRW
LDLRRQTDAF KRADAARDLK LLTDWRRDAT AFADDRELKA LLASDFTGVD TDLSIIESLT
TYLAGVENQF AALDSRSLRS LLHNGEIDVL ASLAQVELDG FPGSVTDLDS ELRLRREKLR
LLEAGLQQIL ALHPRLTNPN ATSPHQLLEL RDILDSYDSG LRAIAEHPLR EPLGRRWCDE
QLRHEDLAAE LDFAELISRR PDWINFYCTV IEHRDLDKIA RLVKADTAPA VFAKMRGLTD
LVELPSRPKD ELVVYAELTQ QFEHMANDRS GLVQHAQAHT CSERVRAFGF GAELDAILEH
ELGIDRLPGV IEARIYRSLA RWVHDQHGEI LAAFRHDGLD KLRRRLATLD RAIIAESAGS
ARRSLFHNAA PPTGIGSGLK SSYTEIALLN HEVSKSKRHI PIRDLTRRAG AALLELKPCW
MMSPLAVAQY LDDPNLHFDL CVIDEASQMT PEHAVGALAR SSQAVIVGDT NQLPPSSFFR
KMVSEGDENE EDIVEDSILE LANSAFRPSR RLRWHYRSRH SGLIAFSNHH VYDDDLIVFP
SAAEGLSNMG VSLVAVDGSY RAGTNSAEAD VMTNAVLRFM HEHPGRSLGV VTLNQKQRDL
VEEKIDHALN HDARALAYVR KWERDRDGLE SFFVKNLENV QGDERDVIFI GTVYGPDSQT
GRVYQRFGPI NGVAGKRRLN VLFSRAKKQI VTFSSMSAAD ISAQADTNPG ANMLKRWLDY
SKTNRFETGE ILDREPDSDF EYHIAEQIRA LGCEAVPQVG VGGFRIDIGV KHPQWPHGFL
LGVECDGANY RSAKSARDRD RLRQEVLEGL GWTLHRVWST HWFDDPATEV HKLRVQIEQR
LREVQSTDGA TSADNATTFK DAVAEELAPE LAPLMPTTTN LANRVDADQV AIGSRIRLRF
LDGNREVHEG TIAEDGDGPT HIPANSPLGV AIIGAEVGDV VPLLVDSRIR RFEVVAVWTR
T
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