Gene Snas_2923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2923 
Symbol 
ID8884122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3073243 
End bp3074301 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content71% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003511691 
Protein GI291300413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000654958 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTGTAC TTGTCACCGG CGGCGCCGGG TTCATCGGCT CCCGGATCGC CACCGCCCTG 
CGGCAGGCCG GACACGACGT CGTCATCGCC GACGTCCTGC TCGCCGCCGC CCACGGCCCA
CATCCCCGCA AGGACCATCC GCACATGTTG TGCGCCGACG TGCGCGATCG CGGCGCCATG
CGGCGCGCGT TGCGCCACGT CGACGTCGTA TGTCACCAGG CCGCGATGGT GGGACTGGGC
AACGGTTTCG CCGACGCCTG CGACTATGTG GACTGCAACG ACCTCGGCAC GGCCGCGCTG
CTGTCGGCCA TGGCCGACGC CGGGGTGCGG CGGCTGGTGC TGGCCGGGTC CATGGTGGTG
TACGGCGAGG GGGTGTACCA CTGCGCCGAG CACGGCCAGG TGCGTCCCGG CCCGCGTCAG
GTCGGCGACC TGGACGCCGG GCGCTTCGAG CCGCCGTGCC CGCACTGCGG CGAAGCGCTG
TCGCCCGGGC TGGTCGAGGA GACCGCCACC ATCGACCCCC GCAACGTCTA CGCCGCCACC
AAGATCGCGC AGGAGTACCT GGCCTCGGCC TGGGCAAGGG CTTGCGCCGG ACGCGTGATC
AGCCTGCGGT ACCACAATGT GTACGGACCC GGCATGCCCC GGGACACGCC CTACGCGGGG
GTGGCGTCGT TCTTCCGCTC CGCACTGGAG AACGGCGAAC CGCCGAAGGT CTTCGAGGAC
GGCGCCCAGC GCCGCGACTT CGTCCACGTC CGCGACATCG CCTCGGCCAA CCTGGCGGCG
CTGGACGCCG TGTACGCCAA CATTCCCGAA GGGACACTGC GGCCCTACAA CGTCGCCAGT
GGAACCCCGC ACACCGTCGG GGAGATGGCC GCCGAGCTGG CCGGTTTCTT CGGCGGGCCC
GAACCCGTGG TCACCGGCGA GTACCGGCTG GGCGACGTCC GGCACATCAC CGCGTCCACG
CGACGCATCC GCTCCGAACT GGACTGGAAA CCGCGCGTCG ACTTCCGCAA GGGCGTCGCC
GAGTTCGCCG CCGCACCGCT ACGAGGAGCC GCGACATGA
 
Protein sequence
MRVLVTGGAG FIGSRIATAL RQAGHDVVIA DVLLAAAHGP HPRKDHPHML CADVRDRGAM 
RRALRHVDVV CHQAAMVGLG NGFADACDYV DCNDLGTAAL LSAMADAGVR RLVLAGSMVV
YGEGVYHCAE HGQVRPGPRQ VGDLDAGRFE PPCPHCGEAL SPGLVEETAT IDPRNVYAAT
KIAQEYLASA WARACAGRVI SLRYHNVYGP GMPRDTPYAG VASFFRSALE NGEPPKVFED
GAQRRDFVHV RDIASANLAA LDAVYANIPE GTLRPYNVAS GTPHTVGEMA AELAGFFGGP
EPVVTGEYRL GDVRHITAST RRIRSELDWK PRVDFRKGVA EFAAAPLRGA AT