Gene Snas_2829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2829 
Symbol 
ID8884027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand- 
Start bp2977668 
End bp2978330 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID 
ProductGTP cyclohydrolase I 
Protein accessionYP_003511598 
Protein GI291300320 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0351357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.452296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCCC CGGCCCCCAA CCCCGCGAAC CTGTCTAGTC TGAGTGAGAT GAAGGTGCCG 
CACGCGATCC CGGCCCAGCG CACGTTGCGT GTGGTCCACG ACCGCGAGGA TGTGGACCTG 
GACGCCGCGC ACAAGGCCGT CACCGATCTG CTGGTCGCGC TGGGTCGCAA TCCGATGTCG 
GAGCACCTGG CCGACACCCC GCGACGGGTG GCCGAGGCCT ACGCCGAGAT GCTCACGCCG 
CGCGAGTTCA ACCTGACGAC GTTTCCCAAC GACGAGGGTT ACGACGAACT GGTGCTCGCC 
CGTGGGATTC CGGTGCAGTC GTTGTGCCAG CACCATCTGC TGCCGTTCCA CGGCGTCGCG 
CACGTCGGGT ACCTGCCCGG GGAACGGATT CTCGGGCTGT CGAAGCTGGC GCGGGTGGTG 
GAGTTGTTCG CCCGCGACCT TCAGGTACAG GAACGACTGA CCAAACAGGT CGCCGACTGG 
TTGCGGGATC ACCTGGCGCC CAAGGGTGTC GGCGTGGTCA TCGAGGCCGA GCACATGTGC 
ATGGCGCTGC GGGGAGTGCG CGCCACCGGT TCGCGCACCC TGACCTCGGC GATGCACGGA 
CAGCTGCGTG ACGACGCCCG CTCGCGGCAG GAGTTCTTCG CGCTCACCGG CACCAACGGC 
TAA
 
Protein sequence
MASPAPNPAN LSSLSEMKVP HAIPAQRTLR VVHDREDVDL DAAHKAVTDL LVALGRNPMS 
EHLADTPRRV AEAYAEMLTP REFNLTTFPN DEGYDELVLA RGIPVQSLCQ HHLLPFHGVA 
HVGYLPGERI LGLSKLARVV ELFARDLQVQ ERLTKQVADW LRDHLAPKGV GVVIEAEHMC 
MALRGVRATG SRTLTSAMHG QLRDDARSRQ EFFALTGTNG