| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2768 |
|---|
| Symbol | |
|---|
| ID | 8883966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 2913819 |
|---|
| End bp | 2914397 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003511537 |
|---|
| Protein GI | 291300259 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.373276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGCGTG TGAATATTCG GTCTGGTCGA CGCGACCTGC TTGAAGTGGC CGCCGAGGTC
CTCACCACGG ACCCCACCGC CAGTCTCGGC GACGTGGCGG CGGCGGCCGG GATCAGCCGC
ACCACACTGC ACTCGCGCTA CCCCAAACGG GACGACCTGC TGCTGGCCGT CAGCCGGGAC
GCGGTCGCGC GGATCTCGGA GGGCATCGCC GAGGTCGGGT TGCCCGGCGC CGACGGGACG
GCCGCCGAAC ACGCCGATGG CCTGCGGCGG TTGATCGCGA CGCTGGTTCC GCTCGGAGCC
AGGATGCACT TCCTGCTGCG GCACTCATCC GCGGATCTCG ACGCGGATCT GGCCGCCAAC
GTCGCGGCGC TCGACGAACC GATCGACGCG TTCGTGCGGG AGGCGCAGCG GGCCGGGGTG
GTCAAGCCGG AACTGGCGCC GTGGTGGGTG ATCTCGACGC TGTACTCGCT GACCTACGCC
GCCTGGGACG GCGTCGCGGC GGGGCGGCTC GCGCCCCTGG ACGCGCCGTC CCAGGTGTTC
GACACGCTCC TGGGCGGAAT CGGGGGAGGA GCGGCGTAG
|
|---|
| Protein sequence | MVRVNIRSGR RDLLEVAAEV LTTDPTASLG DVAAAAGISR TTLHSRYPKR DDLLLAVSRD
AVARISEGIA EVGLPGADGT AAEHADGLRR LIATLVPLGA RMHFLLRHSS ADLDADLAAN
VAALDEPIDA FVREAQRAGV VKPELAPWWV ISTLYSLTYA AWDGVAAGRL APLDAPSQVF
DTLLGGIGGG AA
|
|---|
| |