Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2731 |
Symbol | |
ID | 8883929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 2872621 |
End bp | 2874219 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | glycine dehydrogenase subunit 2 |
Protein accession | YP_003511500 |
Protein GI | 291300222 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0541942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0898713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTGGCC ACACCCCGCG CCGCGACATC GACCCGTCCG AGGCCCGCGT CGCCGCCAAG CCGCCGCTGC GCCGCTTCCA CCAGGCCCGC TGGGACGAGT CGCTGATCTT CGAGCAGTCG AAGCCCGGCC AGCGCGGCGT GCTGCCGCCC AGCGTCGAGC CCGAGATCGC CGACGCCGTC GGCGATCCGG CCGCCGCGCT GCCGGACGAG CTCAAACGCG CCACCCCGCC CGCGCTGCCG GAACTGTCGC AACTGGAGGT GCTGCGGCAC TATCTGCGGC TGTCGCAGGA GAACCTCGGC GTCGACTTCA ACATCGACAT CGGACAGGGC ACCTGCACCA TGAAGTACTC CCCCAAGGTC AACGACCAGC TGGTGGCCGG ACACAAGCTC GCCGAGTTGC ATCCGTTGCA GGACAACGGG ACCGTGCAAG GTGTGCTGGA GATCTTCTCG CGTATGGAGG AGATGCTGGC CGAGATCTCC GGCATGGACC GGGTCAGTCT GCAACCGGGC GCCGGTTCGG CGGCGATCTG GACCAACGTG GCGATGGTGC GCGCGTACCA CGCCTCCCGG GGCGAGTCGC ACCGCGACGA GATCATCACG ACGGTGTTCT CGCATCCGTC CAACGCGGCA TGCGCCGCCA CCGCCGGATA CAAGGTGATC ACCCTCTACC CGGACGCCGA CGGCTACCCG GATCTGGACG CGCTCAAGGC CGCGGTCGGC GACCGCACCG CCGCGCTACT GATCACCAAC CCCGAGGACA CCGGGATCTT CAACCCGCGC ATCGAGGAGT TCGTGGCGGC GGTGCACGAG GTCGGCGGGC TGGCGGTCTA CGACCAGGCC AACGCCAACG GCATCCTGGG CATCACCCGG GCCCGCGAGG CGGGCTTCGA CCTGTGCCAC TTCAACCTCC ACAAGACCTT CTCCACCCCG CACGCCTGCG GCGGACCGGC CGCCGGGGCC TGCGGCGTCA CCAGTGCCCT GGAACCGTTC CTGCCCAAGC CGACCGTCGA ACACGACGGC ACCCGGTACT GGCTTGACCA CGACCGTCCA CTGTCAATCG GGAAGGTGCG CCCGTTCCTG GGGGTGGCCG CCAACGTCGT GCGGGCCTAC GCGTGGATCA TGAGCCTGGG TGCCGAGGGG CTGCGCGAGG TCGCCGAGAC CGCGGTGCTC AACAACAACT ACCTGCTGGC CGAGATGCTC AAGATCGACG GCGTCTCAGC GCCGTACGCG GAGGGCAAGC ACCGCATCGA GCAGGTGCGG TACTCGTGGC AGAAGCTGCA CGAGGACACC GGCGTGCACT CGGAGGACCT GGGGCTGCGG GCCGCCGACT TCGGGGTGCA CTACTGGACC AGCCACCATC CGCACCTGGT CGCTGAACCG GCCACTCTGG AGCCGACCGA GTCGTATTCG AAGGCGGACC TGGACGAGTA CGTCGCGATC ATGCGCCAGG TGGCGCACGA GGCGTACACC GAACCGGAGA CGGTGCGCAC CGCGCCGCAC CGGTCCACGA TCCACCGCAC CAAACACGAC ACGCTCGAGG ACCCGGGCAC CTGGGCCGTG ACGTGGCGCG CCTACCGACG CAAGACGGCG ACGGAATGA
|
Protein sequence | MSGHTPRRDI DPSEARVAAK PPLRRFHQAR WDESLIFEQS KPGQRGVLPP SVEPEIADAV GDPAAALPDE LKRATPPALP ELSQLEVLRH YLRLSQENLG VDFNIDIGQG TCTMKYSPKV NDQLVAGHKL AELHPLQDNG TVQGVLEIFS RMEEMLAEIS GMDRVSLQPG AGSAAIWTNV AMVRAYHASR GESHRDEIIT TVFSHPSNAA CAATAGYKVI TLYPDADGYP DLDALKAAVG DRTAALLITN PEDTGIFNPR IEEFVAAVHE VGGLAVYDQA NANGILGITR AREAGFDLCH FNLHKTFSTP HACGGPAAGA CGVTSALEPF LPKPTVEHDG TRYWLDHDRP LSIGKVRPFL GVAANVVRAY AWIMSLGAEG LREVAETAVL NNNYLLAEML KIDGVSAPYA EGKHRIEQVR YSWQKLHEDT GVHSEDLGLR AADFGVHYWT SHHPHLVAEP ATLEPTESYS KADLDEYVAI MRQVAHEAYT EPETVRTAPH RSTIHRTKHD TLEDPGTWAV TWRAYRRKTA TE
|
| |