Gene Snas_2728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2728 
Symbol 
ID8883926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand- 
Start bp2869850 
End bp2870506 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003511497 
Protein GI291300219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.246809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.158024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATTG AGCGCCGCCC GCTGCGCGAC GAGATCAAAC GCGAGGTGCT GGAACGGTTT 
CGCCGGGGCG ACTACCCGGC CGGGCACAAC ATCCGGGAGA GCCAGCTGGC CGCCGACCTG 
GGGGTGTCGC GCACACCGCT GCGCGAGGCG CTCATCGCGC TTGAGATCGA AGGACTGATC 
AAGTCCCAGC CGGGCAAGGG TTTCCGGTTC GCGCCGGTCA GCCCCAAGGA GTACAAGGAA 
CTGGGGCCGG TGGTGGCGGC CCTGGAGGCG CTGGCCCTGG AAACCTCCGA CAGGGACTAC 
ATAGACACCA CGGCACCGAG ACTGCTGGCG CTGGCCACCG AGTTCGACGC CTCGGTGGCC 
ACCCAGGCCG AGATCGACGA ACGCGACGAC GAATGGCACG ACCTGCTGTT GGGCGGCTGC 
GACAACGAAC GCCTGATGGA CCTGCTCACG ACGCTCAAGG CGAGCCTGCG GCGCTACGTG 
CATCTGCTGG TCGACGACGA GACCCAGCTC AGCCGCTCCG CCGGTGAGCA CCAGCTGATC 
GCCGAGCGCC TGATCGCCGG GGACCTGCCG GGAGCTGTGG AAGCCCTGAA AGCCAACTGG 
AGCAGCGGTT CGGCGCGGAT CCTGGAGAAA CTGGCCGAGC TGGACGGCCA GCGGTAA
 
Protein sequence
MVIERRPLRD EIKREVLERF RRGDYPAGHN IRESQLAADL GVSRTPLREA LIALEIEGLI 
KSQPGKGFRF APVSPKEYKE LGPVVAALEA LALETSDRDY IDTTAPRLLA LATEFDASVA 
TQAEIDERDD EWHDLLLGGC DNERLMDLLT TLKASLRRYV HLLVDDETQL SRSAGEHQLI 
AERLIAGDLP GAVEALKANW SSGSARILEK LAELDGQR