Gene Snas_2591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2591 
Symbol 
ID8883786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2731823 
End bp2732401 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content65% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003511363 
Protein GI291300085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.266738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGGA CCAGGGATCG GATACTCGCC GCGGCCAAGG AAATGGTCGT CACCGACGGC 
AGTCAGGCCG TGAGCATGCG AAAAATCGGC GCGATTGTGG GCGTAACGCC CATGGCCGTA
TATCGCCACT TTCCCAACCG GGAGGCGCTG CTGGACGCCG TCGCCGACGA GTGCTTCACC
GAGACCGCCG CGAAATGGGC CACGGTGCGG CTGCCGGACG ACATCCTCGA GGGCTCGAAG
GTGATCGTCG ACCTGTTCGT CGACGTGGCA CTGGAGAGCC CCGGCCTGTT CAGTTTCATG
TTCATCGAGG AACGCCAGGG CGCCCGCCGG TTCCCCGACG ACTTCCAGAC CGGCGAGTCC
CCCACCTTCG AACTGCTCGG CGGGCACGTC GCCGCCGCGA TCGCGGACGG CAGGTTGCGG
CCGATCGAGC ACTGGCGCAT CGCGCTGGCC TACACGGCGC TCATCCACGG CCTGACCCAG
ATGTACATCG GCGGCCGCAT CAACCTGTCG GGAGACGACT TCCGGCAGCT TTGTCACGAC
AATACGGAGT TGCTCGTCAA TGGACTCGCC CCTCGTTAG
 
Protein sequence
MLGTRDRILA AAKEMVVTDG SQAVSMRKIG AIVGVTPMAV YRHFPNREAL LDAVADECFT 
ETAAKWATVR LPDDILEGSK VIVDLFVDVA LESPGLFSFM FIEERQGARR FPDDFQTGES
PTFELLGGHV AAAIADGRLR PIEHWRIALA YTALIHGLTQ MYIGGRINLS GDDFRQLCHD
NTELLVNGLA PR