Gene Snas_2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2587 
Symbol 
ID8883782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2727527 
End bp2728057 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003511360 
Protein GI291300082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.305153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACG TCATGGCACT CGGCAAGGGC TACGGCAACC AGGACTGTTC GATGGCGCGC 
GGCCTGGAAC TGGTCGGTGA ACGCTGGACG CTGCTGATCG TTCGCGACGC CTTCTACGGC
GTCCGCCGCT TCAGCGACTT CCTGGCCCAC CTGGAGATTC CGCGCGCGGT GCTGTCGGAA
CGGCTCCAGT ACCTGACCGA CATGGGCGTG CTGTCCAAGG ACAGCCACGA GGGCTCGACG
CGGGCCGAAT ACGCCCTCAC CGACACGGGG CTGGCGCTGT GGCCCGTCCT GGCCTCACTG
TCGCAGTGGT CCAACGAATA CCTCCACAGC GAGGCCGGAC CGTACCTGAT CTACGAACAC
GACCCGTGCG GCACCGAACT GGCCGACCGC CTCAACTGCC CGACCTGCGG CGAGCGCGTG
CGGCTGGCCG ATATCGCGAC ATCCCCGGGC CCGGCCGCCA ACCGGACCCG CGACGACGTG
GTCAGCCGGT CGCTGCTGAA GCGACGGCGA CTGCTCGACC CGATCCGGTA A
 
Protein sequence
MMDVMALGKG YGNQDCSMAR GLELVGERWT LLIVRDAFYG VRRFSDFLAH LEIPRAVLSE 
RLQYLTDMGV LSKDSHEGST RAEYALTDTG LALWPVLASL SQWSNEYLHS EAGPYLIYEH
DPCGTELADR LNCPTCGERV RLADIATSPG PAANRTRDDV VSRSLLKRRR LLDPIR