Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2587 |
Symbol | |
ID | 8883782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2727527 |
End bp | 2728057 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003511360 |
Protein GI | 291300082 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.305153 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGACG TCATGGCACT CGGCAAGGGC TACGGCAACC AGGACTGTTC GATGGCGCGC GGCCTGGAAC TGGTCGGTGA ACGCTGGACG CTGCTGATCG TTCGCGACGC CTTCTACGGC GTCCGCCGCT TCAGCGACTT CCTGGCCCAC CTGGAGATTC CGCGCGCGGT GCTGTCGGAA CGGCTCCAGT ACCTGACCGA CATGGGCGTG CTGTCCAAGG ACAGCCACGA GGGCTCGACG CGGGCCGAAT ACGCCCTCAC CGACACGGGG CTGGCGCTGT GGCCCGTCCT GGCCTCACTG TCGCAGTGGT CCAACGAATA CCTCCACAGC GAGGCCGGAC CGTACCTGAT CTACGAACAC GACCCGTGCG GCACCGAACT GGCCGACCGC CTCAACTGCC CGACCTGCGG CGAGCGCGTG CGGCTGGCCG ATATCGCGAC ATCCCCGGGC CCGGCCGCCA ACCGGACCCG CGACGACGTG GTCAGCCGGT CGCTGCTGAA GCGACGGCGA CTGCTCGACC CGATCCGGTA A
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Protein sequence | MMDVMALGKG YGNQDCSMAR GLELVGERWT LLIVRDAFYG VRRFSDFLAH LEIPRAVLSE RLQYLTDMGV LSKDSHEGST RAEYALTDTG LALWPVLASL SQWSNEYLHS EAGPYLIYEH DPCGTELADR LNCPTCGERV RLADIATSPG PAANRTRDDV VSRSLLKRRR LLDPIR
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