Gene Snas_2401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2401 
Symbol 
ID8883596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2547025 
End bp2547921 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content72% 
IMG OID 
ProductNmrA family protein 
Protein accessionYP_003511177 
Protein GI291299899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.242645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000749924 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAAGC AGGACAAGAC CATCCTCGTC ACCGGCGCCA CCGGCAAGCA GGGCGGTGTC 
ACCGCCCGCG CGCTGCTGGC TGACGGCTGG CGGGTGCGCG CGTTGGTGCG CGACGCGAAG
GCGCGCACCG CGGGCGCGCT CGCCGAGGCG GGGGCGAGCC TGGTGACCGG GGACTTCGAC
GATCCCGCGT CGCTGGCGGC GGCCAGCGCG GGGGCGTACG GGTTGTTCGC CGTACCGCCA
GCCGTCTACG AACCGCAGGG CTGGAACGTC GAGTTGGAGA CCCGGCGCGG TGCCGACCTC
GTCGACGCGG CCACCGCCGC CGGGGTCGAG CACATCGTGT TCACCGGGAT CGCCACGGCG
ACCGGAGCCG GACTGACCGG CTCCAGCGGC AAACAGCGCA TCGAGGAACA CATCAAGGCC
ACTGGAAGGC GGTACACGCT GTTGCGGCCG GTGCGGTTCA TGGAGAACTA CCTGTTCCGC
GAGTCGCCGG TGGACGGCAT CCGCCACGGG GTTCACCGGC ACCTGTTCCA TCCCGACCGT
CCGATGCAGA TCATCGCCGT GGCCGACGTC GGCGCCATCG CGGCGCTGGC CTTCGCCGAT
CCGGACACCT ACGGCGGCAA GGCACTGGAG CTGGCCGGGG ACGCGCCGAC GCCGGTGGCC
GCCGTGAAGG CGATCAGTGC CGCCCTCGGC CGCGAGATCC GGTACGAGCA GTTCACGGCG
GCCGAGGCCG AGCGGCTGGG CCCCGAGATC GCCGATATTC GGACACTGTG GACTGAGGGG
AACGGCTGGA ACGCCGACAT TCCCGCGATC CGCGAGCTCC ACCCCGGTCT GCTCGACTTC
GAGGGCTGGC TGGCTGCCGG TGGCGCCGAG CGCATCAAGG CGGCGATCAG CGGCTAG
 
Protein sequence
MSKQDKTILV TGATGKQGGV TARALLADGW RVRALVRDAK ARTAGALAEA GASLVTGDFD 
DPASLAAASA GAYGLFAVPP AVYEPQGWNV ELETRRGADL VDAATAAGVE HIVFTGIATA
TGAGLTGSSG KQRIEEHIKA TGRRYTLLRP VRFMENYLFR ESPVDGIRHG VHRHLFHPDR
PMQIIAVADV GAIAALAFAD PDTYGGKALE LAGDAPTPVA AVKAISAALG REIRYEQFTA
AEAERLGPEI ADIRTLWTEG NGWNADIPAI RELHPGLLDF EGWLAAGGAE RIKAAISG