Gene Snas_2247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2247 
Symbol 
ID8883441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2383158 
End bp2383901 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003511030 
Protein GI291299752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.687068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0553292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGC AGACCAGCGT CCGCGCCGCC ACGGCGGTCC GGCTGACCGA AGTGACCAAG 
AAGTACCGGG GCGGCGTGAC CGCACTGGAC CACGTCAGCC TGCCGGTGCC GCGCGGCACC
TTCCTGGCGG TCATGGGGCC CTCGGGTTCC GGCAAGAGCA CCCTGCTGCA CTGCGCGGCG
GGACTGGACG TTCCCACCGA CGGATCCGTC CACATCGGTG ACACCGAGAT CTCGGGGCTG
TCGGAGACGA AACGCACCAT GCTGCGGCGC GAACGCGTCG GCTTCGTGTT CCAGGCGTAC
AACCTGGTGC CCTCGTTGAG CGTCTCCGAC AACATCACGC TGCCACTACG ACTGGCCGGG
GCGCGCCCCG ATCACGACTG GCTGCGGACC CTGGTCGCCC ACATCGGACT GGAGGGGCTG
TTGAACCGTC GTCCCGCCGA ACTGTCCGGC GGCCAGCAGC AGCGCGCCGC CGTGGCGCGG
GCCCTGGTGG CCCGGCCCGA CGTGGTGTTC GCCGACGAAC CCACCGGCGC GCTCGACCTG
CACACCGCCG GTGAGGTGCT GGACCTGCTG CGGCGCTTGG CCGACGACTT CGGCCAGACC
GTCGTCATGG TCACCCACGA CCCGGGGGCG GCGGCTCGCG CCCACGAGGC GGTCGTCATG
GCCGACGGCC GGATCCGCGA CGTGGTGGCG ACGCCGTCGG CCGAGAAGCT GGCGCAGCTG
CTGACCACAC TGGAACGGCG GTGA
 
Protein sequence
MNTQTSVRAA TAVRLTEVTK KYRGGVTALD HVSLPVPRGT FLAVMGPSGS GKSTLLHCAA 
GLDVPTDGSV HIGDTEISGL SETKRTMLRR ERVGFVFQAY NLVPSLSVSD NITLPLRLAG
ARPDHDWLRT LVAHIGLEGL LNRRPAELSG GQQQRAAVAR ALVARPDVVF ADEPTGALDL
HTAGEVLDLL RRLADDFGQT VVMVTHDPGA AARAHEAVVM ADGRIRDVVA TPSAEKLAQL
LTTLERR