| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2189 |
|---|
| Symbol | |
|---|
| ID | 8883382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 2329398 |
|---|
| End bp | 2330033 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Ribonuclease H |
|---|
| Protein accession | YP_003510974 |
|---|
| Protein GI | 291299696 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0375118 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.780394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGTCC TGGAGAACGC GCTGCGCCGC CGGGGCTTCA CGCTGGTCGC GGGAGCCGAC
GAGGCGGGGC GGGGAGCGTG CGCGGGCCCG CTGGTGGTGG CCGCGGCGAT CCTGCCGGAC
GGCGCCCGGG GCCAGATAGC GGGACTCACC GATTCCAAGC TGTTGACCGA ACGAGCCCGC
GAGGACATCT ACGCTCAGGT CGTGGACCGG GCCGTCGCGC ACGCGATCGT CGTGATCTCC
CCGGCCGAGG TGGACCGCCT CGGCGTGGGA GCCAGCAACC TGTCGGGAAT GCGCCGGGCC
CTGGCCCGGC TCGACCCGAT GCCGGCCTAC GCGTTGACCG ACGGCTTCCC GGTCCCGGGT
CTGCCGGTGC CCGGACTGGG CGTGTGGAAG GGGGACAGGG TGGCGGCCTG CGTCGCGGCG
GCCAGCGTGT TGGCCAAGGT CACCAGGGAC CGGATCATGA CCGAACTGGA ACAAAACCAT
CCCGGTTACG GTTTCGCCGA GCACAAGGGA TACGGCACCG CGGCGCACAC CCACGCGCTG
CGGACGCTGG GGCCTTGCCC GCAGCACCGG CTCTCCTATG CGAATGTGGT GGAGGCCGTG
AGCGGGAACC CGCGTGTCGC CCAGGCGGCG AATTGA
|
|---|
| Protein sequence | MYVLENALRR RGFTLVAGAD EAGRGACAGP LVVAAAILPD GARGQIAGLT DSKLLTERAR
EDIYAQVVDR AVAHAIVVIS PAEVDRLGVG ASNLSGMRRA LARLDPMPAY ALTDGFPVPG
LPVPGLGVWK GDRVAACVAA ASVLAKVTRD RIMTELEQNH PGYGFAEHKG YGTAAHTHAL
RTLGPCPQHR LSYANVVEAV SGNPRVAQAA N
|
|---|
| |