Gene Snas_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2188 
Symbol 
ID8883381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2328644 
End bp2329336 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content64% 
IMG OID 
Productsignal peptidase I 
Protein accessionYP_003510973 
Protein GI291299695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0349531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACCGG GGGCGGTGGC CGACGACGCC GAGGACAACG ACAAGAAGCC GGCGTCGAAG 
ACCAAGAAGA AGGGCTCGTT CTGGCGCGAG CTTCCGGTTC TGCTCGTCGT GGCGGTCGTG
GTGGCACTGC TGGTGCGCAC CTTCGTGTTG CAGTCGTTCT GGATCCCGTC GGGTTCCATG
GAGAACACCC TGCAACTCAA CGACTACGTC CTGGCGAACA AGCTGATCTA CGATTTCCGG
GATCCGGAAC GCGGCGAGAT CGTCGTGTTC AAGGCACCGC AGTCCTGGCA GGGGGCCCCG
GGGGAAGAGG ACTTCATCAA GCGGGTCATC GCGGTCGGGG GCGACACGGT GTCCTACAGC
AAGAAGGACA AGCACATCCG CGTCAACGGC GAACCGCTCG ACGAGGAGTC GTACCTGTAC
ACCAACCCGG AGACCGGCAA GCAGCAGTCA CCGAGCCTGG AGGACCAGGA GTTCAAGGTC
AAGGTCCCCG AGGGCAGGTT GTGGGTCATG GGGGACCACC GCTGGGCCTC CGGCGACTCG
CGGGAACGGT GGGAACGCAC CGAGGACGAG ATGGAGTCGA CCATTGCGGT CGACTCGGTC
ATCGGTAAGG CGTTCGTGCT GATCTGGCCG GTCAACCGCT GGGACGGCCT GACCATCCCC
GACACCTTCG ACGGAGTACC CGAACCCAAG TGA
 
Protein sequence
MPPGAVADDA EDNDKKPASK TKKKGSFWRE LPVLLVVAVV VALLVRTFVL QSFWIPSGSM 
ENTLQLNDYV LANKLIYDFR DPERGEIVVF KAPQSWQGAP GEEDFIKRVI AVGGDTVSYS
KKDKHIRVNG EPLDEESYLY TNPETGKQQS PSLEDQEFKV KVPEGRLWVM GDHRWASGDS
RERWERTEDE MESTIAVDSV IGKAFVLIWP VNRWDGLTIP DTFDGVPEPK