Gene Snas_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2179 
Symbol 
ID8883372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2322231 
End bp2322716 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510964 
Protein GI291299686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.806217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTACG ACCCTAAAAA CCCGCACTAC GACCCGTACA CCGCTCCGCC GGTGTACGAC 
AACCAGCCGG TGACCGGCGG GGGCTACCCC GACGGCGGCT ACCCCGACTC GCCCCAGCAG
CAGGGCGGCT ACGACCAGTA CGCCTACCAG CAGCAGCCTC CCGGCCCCGC CTACAACGCG
GCCGGATACT CCCCGCCCCC GATGCAGATG TACCAGGCGC CGGAGAACGG CTCCGGCACC
GCCGCCCTCG TTCTGGGAAT CCTCGGCCTG GTCGGCTGCG GACTGTGCGC CATCCCGGCC
GTCATCTGCG GCCACATGGG AATGAAGAAG GCCGACCAGG GACTCGCCGA CAACCGCGGC
CAGGCGCAGG CGGGCCTGAT CATGGGCTAC ATCGGGGTGG CGTTCCTCGT GCTCGCGTTG
TTGTACGTTG TCTTCATGCT CGTGATGTTC GGCGCGTTGG CGTCGTCGTC GACGACTTCG
TACTGA
 
Protein sequence
MTYDPKNPHY DPYTAPPVYD NQPVTGGGYP DGGYPDSPQQ QGGYDQYAYQ QQPPGPAYNA 
AGYSPPPMQM YQAPENGSGT AALVLGILGL VGCGLCAIPA VICGHMGMKK ADQGLADNRG
QAQAGLIMGY IGVAFLVLAL LYVVFMLVMF GALASSSTTS Y