Gene Snas_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2141 
Symbol 
ID8883334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2271405 
End bp2272166 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_003510928 
Protein GI291299650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.386533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.871763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGCGG AGGAACGTCA GCAGGAGATC CTGCGGCGGG CGCGCGCGGC AGGCCGGGTG 
GACGTCGTCA CCCTCGCCGA GGCTCTCGGC GTGACCGCCG AGACCGTGCG CCGGGACCTC
ACCGTCTTGG AACGCGCCGG GGTCGTCCGC CGAGTCCATG GTGGCGCCAT CCCGATCGAG
CGGATCGGTT TCGAGCGCGC GGTCGCCACC CGCGACACCG TGCTGACCGC CGAGAAGGAA
CGCATCGCCA AGGCCGCGGT GGCCGAGATC CCCGAGGACG GGGCCATCAT CCTGGACGCG
GGCACGACCA CCGCGCGACT GGCGCAGCTG ATCCCGACCG ACCGTGAGCT GACCGTGGTG
GTCAACTCGC CGGTGCTGGC CGCGACCCTG GGCCCCAACC CGAACCTGAC CGTGCTGTTG
CTCGGCGGCC GGGTGCGGGG CAAGACCCTG GCCACCGTCG ACGACTGGGC GCTGCGTCCA
CTGGAGAACC TGCACGTGGA CGTGGCCTTC ATGGGCACCA ACGGCTGCAC CATCGACCGG
GGTCTGACGA CTCCGGACCA GGCCGAGGCC GCCGCGAAGC GGGCCATGAT CGCCGCCGCA
CGGCGGGTCG TGGTGCTGGC CGACCACACC AAGGTCGGCA CCGACCACTT CGCCCGGTTC
GGAACCATGT CCGATGTGGA CGTCATCATC ACCGACACCG GTCTGGACCC CGAACTGGGA
GCCGAACTGG ACGAAGCCGG AATCCGTGTG GTGCAGGCAT GA
 
Protein sequence
MYAEERQQEI LRRARAAGRV DVVTLAEALG VTAETVRRDL TVLERAGVVR RVHGGAIPIE 
RIGFERAVAT RDTVLTAEKE RIAKAAVAEI PEDGAIILDA GTTTARLAQL IPTDRELTVV
VNSPVLAATL GPNPNLTVLL LGGRVRGKTL ATVDDWALRP LENLHVDVAF MGTNGCTIDR
GLTTPDQAEA AAKRAMIAAA RRVVVLADHT KVGTDHFARF GTMSDVDVII TDTGLDPELG
AELDEAGIRV VQA