Gene Snas_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2081 
Symbol 
ID8883274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2208231 
End bp2209976 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003510868 
Protein GI291299590 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGGAC TGCCGGTCGC GACCTCGCGA GAGACCGCCC GCGAGGTCGG CAGCATCGCC 
GCCGCCTACA AGGGACAGGT CTTCTGGACG GTGGTGCTGT ACACGATCGC CTCGGCGGCC
GGGCTCGGCG CGCCGTGGCT GCTGGGTGAG CTCATCGACT CCCTCGACGC GGGCAACACC
TCCACCGTGG ACGCCATCGC GATGGCGGTG GCCGGTTTCG TGTTGACGCA GGCGTTGTTC
AGCGGGATCT CGCACTACGT GTCCAGCCGG TTCGGCGAGA CCGTGATGGC GAGGCTGCGC
GAGGAGTTCG TCCGCCGGTC GCTGGCGCTG CCGTTGAGCA CTGTGGAGCG CGCGGGTACC
GGGGACCTGA TGACCCGCTC CTCGCGCGAC ATCGCGCAGC TGGGCCAGGT GCTGCGTCGC
GCCGCTCCCG AGAGCTTCGT GTGCGTGCTG ACGCTCGTGC TGACCCTCGC GGCGCTGACG
CTGGCCAGCC CGCTGCTGGC GCTGGTCGCG CTGGTGACGA CGGTGCCGGT GCTGTGGGCG
CCCGCCCGGT GGTACCTGCG CCGGGCCCGC GAGGCCTACC TGGCTGAGAA CGCCACCTAC
AGCGAGATCG CCGAGGGGCT GGCCGCCACG GTCGAGGGTG CCAGGACCGT TGAGGCACTG
CGGATCCAGC GGGACCGCAT CGACAAGGGA CAGGCCGTGA TCGGCAAGTC CTACGGGGCC
GAGCGCCGGA CGCTGTTCCT GCGCAGCGTC CTGTTCCCGT CGCTGGACTT CGGCGTGACG
CTGCCGGTGG CGGCGGTGCT GCTGGTCGGC GGGCTCATGT ACGCCGCCGA CCTGACGACG
CTGGGCGCGG TGACCGCGGC GGTGCTGTAC ATCAACCAGG CCGGGGAACC GATGTTCATG
CTGCTGGCCT GGCTGGACGA GCTCCAGACC GGCGACGCCT CGCTGGGGCG CATCATCGGC
GTGGGGCCGA TCAAGCAGGC CACGGTGGAC GAGAAGCGGC CCGCCCCGCA GGAACACGGC
GCGGCGGTGC GGGTGCGCGA TGTCCGCTAC GCCTACAACG AGGGGCACGA CGTCCTGCAC
GGCGTGAGCC TCGACATCGC GCCCGGCGAG CGGCTGGCCG TCGTCGGGCC CTCGGGCGCG
GGAAAGTCCA CTCTGGGGCG TCTGATCGCG GGCATCGACT CCCCCGGCAT GGGTTCCCTG
ACCGTGGCGG GGCACGACCT GCGGGACGCG ACGCTTGAGG AACTGCGTCG TGAGGTGCTG
CTGGTGACCC AGGAACACCA CGTGTTCCTG GGTACGGTGC GGGACAACCT GGCGCTGGCC
AACACGTCGG CGACCGACGA GCAGATCACC GAGGCGCTGA CCGCTGTGGA CGCCGACGAG
TGGCTCGCCT CGCTGCCGCA CGGGCTGGAC ACCGTCGTGG GCTCGGCCGA GCTCAAGGTC
GAACCGGCTC GGGCGCAACA GATCGCGCTG GCCCGGCTGG TGCTGGCCGA CCCGGACGTG
CTGGTCCTGG ACGAGGCCAC CAGCCTGCTG GACCCCCGCG CGGCCCGCCA TCTGGAGCGG
CACCTCGCGA CCGTCCTGTC AGGACGTACC GTGGTGGCGA TCGCGCACCG GCTGCACACC
GCGCACGACG CCGACCGCAT AGCGGTCGTC GAGGACGGCC GCATCGCCGA GCTGGGCTCC
CACGACGAGC TGGTGGCCGC TGGCGGCCAC TACGCCGCCC TGTGGCGCTC CTGGCAAGGC
AACTAA
 
Protein sequence
MSGLPVATSR ETAREVGSIA AAYKGQVFWT VVLYTIASAA GLGAPWLLGE LIDSLDAGNT 
STVDAIAMAV AGFVLTQALF SGISHYVSSR FGETVMARLR EEFVRRSLAL PLSTVERAGT
GDLMTRSSRD IAQLGQVLRR AAPESFVCVL TLVLTLAALT LASPLLALVA LVTTVPVLWA
PARWYLRRAR EAYLAENATY SEIAEGLAAT VEGARTVEAL RIQRDRIDKG QAVIGKSYGA
ERRTLFLRSV LFPSLDFGVT LPVAAVLLVG GLMYAADLTT LGAVTAAVLY INQAGEPMFM
LLAWLDELQT GDASLGRIIG VGPIKQATVD EKRPAPQEHG AAVRVRDVRY AYNEGHDVLH
GVSLDIAPGE RLAVVGPSGA GKSTLGRLIA GIDSPGMGSL TVAGHDLRDA TLEELRREVL
LVTQEHHVFL GTVRDNLALA NTSATDEQIT EALTAVDADE WLASLPHGLD TVVGSAELKV
EPARAQQIAL ARLVLADPDV LVLDEATSLL DPRAARHLER HLATVLSGRT VVAIAHRLHT
AHDADRIAVV EDGRIAELGS HDELVAAGGH YAALWRSWQG N