Gene Snas_2072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2072 
Symbol 
ID8883265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2193551 
End bp2194645 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content68% 
IMG OID 
ProductAgmatine deiminase 
Protein accessionYP_003510859 
Protein GI291299581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATGT CCAGGCGGGA CGGACTGCGC GCGGCGATGG CGGCCGCGGC GGGTGGCGCG 
TTGAGCGGCT GCGGAGGCGA CGACGGCGGT CCCACCGAGA AGTGGCGCAT GCCCGACGAG
GCCCACCCGC ACGAGCTGAC CTACATGTCC TGGCCCACCG AGAAGATCTG GGGGCCGTAC
ATCGACGACG TGCGCGACGA CATCGCGGGC ATCGCCCGGG CGATCGCCGA GTTCGAGCCG
GTGGTGTTGC TGGCCAACGC ATCGGACGTC AAAGCCGCGA GCAAGGCCTG CGGATCCGAA
GTGGATGTCA TTCCGATCCC GGTCGACGAC CTGTGGACCC GCGACACCGG ACCGAACCTC
GTCCTCGGTA AGGGGGGCAT CGCCGGGGTG GACCTCAACT TCAACGGCTG GGGCGACAAA
CAGTCCAACA AACGGGACCG CGAGGTCGCC CGCGAGATCC TCGCCGAGGC CGACATCGAA
CGGATCAAGG CGCCGATCGT CGGCGAGGGC GGCTCCATAG AGGTCGACGG CAAGGGCACC
CTGCTGGCCA CCGAGAGCTC ACTGGTCAAC GACAACCGCA ACCCCGGCAA GTCCCGCGAC
GACATCGAGG CGGCGCTGAA GCGGCTGTTC GGTGTCACCA CGGTGATCTG GGTGAAGGGC
GTCAAGGGCG AGGACATCAC CGACTACCAC ATCGACGCGC TGGCGCGGTT CAGCGAACCC
GGGGTCGTCG TCATGAGCGT TCCCGACGAG GAGGCTCCCG AGGACGTGTG GACCCGCGCC
TACGACCAGG CTCGCGCGGT GCTGGACGAG GCCGTCGACG CGCGGGGGAA GCGGCTGGAG
ATCGTCGAGC TGCCCGAACC GTTCGACATC GGTGACCGGG GCGAGAACTT CCTGGCCAGC
TACGTCAACT ACTACGTGGT CAACGACGGC GTCGTGATTC CCCGCTTCGG TGACAAGCGT
GCCGACGCCG ACGCCAAGTC CATCGTGGCC GATCTGTATC CGGGCCGTGA GGTCGTGCAG
GTGTCCGTCG ACGGCCTCGG CGAGGGCGGC GGCGGTATCC ACTGTGCCAC CCAGCAGCTG
CCGAAGTCGG CGTAG
 
Protein sequence
MRMSRRDGLR AAMAAAAGGA LSGCGGDDGG PTEKWRMPDE AHPHELTYMS WPTEKIWGPY 
IDDVRDDIAG IARAIAEFEP VVLLANASDV KAASKACGSE VDVIPIPVDD LWTRDTGPNL
VLGKGGIAGV DLNFNGWGDK QSNKRDREVA REILAEADIE RIKAPIVGEG GSIEVDGKGT
LLATESSLVN DNRNPGKSRD DIEAALKRLF GVTTVIWVKG VKGEDITDYH IDALARFSEP
GVVVMSVPDE EAPEDVWTRA YDQARAVLDE AVDARGKRLE IVELPEPFDI GDRGENFLAS
YVNYYVVNDG VVIPRFGDKR ADADAKSIVA DLYPGREVVQ VSVDGLGEGG GGIHCATQQL
PKSA