Gene Snas_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2011 
Symbol 
ID8883203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2133678 
End bp2134895 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510799 
Protein GI291299521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0491359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAG CCCTGGGCAC CCGCTACGGC GCCAACTACG TACCGTCCTC CAACTGGTTC 
TACAGCTGGC TCGACTTCTC GGCCGACGCG GTGCGGCGCG ACTTCGACGA CCTGGCCTCG
ATCGGACTCG ACCACGTCCG GGTGTTCCCG ATGTGGCCGT GGATCCAACC CAACCGGGGC
CACATCCGGA CCAAACCGAT CCGGGACCTG CTGACCGTCA TCGACATCGC CGCCGAACGC
GGCCTCGACG TCGCCGTCGA CCTGCTGCAG GGCCACATGT CCAGCTTCGA CTTCCTCCCC
TCATGGGTGC TCACCCACCA CCACCGCAGC ATCTTCGAGG ACCCGGACGT CCGCGACGGC
ATCGCGTCCT ACATGTCAAC ACTCAGCCGC GCCGTCGCCG ACAAACCCAA CGTCTTCGCC
ATCACGCTCG GCAACGAGGT CAACAACCTG GTCCCGTTCT ACTCCGCGAC CCCAGAAGCC
ACCCGCGACT GGGCAAGCGG CCTCCTGAAC GTAGTCGCCG AAGCGGCACC CGACGTCCTG
CACCTGTACT CGGTGTACGA CGCCAGCTGG TACACCCCCG GCCACCCCTT CGACCCGGCC
GACTCCACCG ACCTGGGTTC ACTGACCACG GTGCACTCAT GGGTCTTCAG CGGCGCGGCG
GCCATCGACG GCCCCCTCGG CCCGGCCACC GTCTCACACG CCGACTACCT CATCGAACTG
GCCGCCGCCA CCGCCACCGA CCCGGCCCGC CCGATCTGGC TCCAAGAAGT CGGGGCACCC
CAACCGCACG TCCCCGCCAC CGACGCGGGC GAGTTCACAA CCCAAACGCT GGCCCACATC
GACTCCAACC CCGCACTGTG GGGCGTCACC TGGTGGTGCT CCCACGACCT CGACCGCCGC
CTGCTGGACT TCCCCGAGCA CGAATACGAC CTGGGCCTGT TCACACTCGA CCACCAACCC
AAACCCGCGG CCCGGGCACT GGAACGCTTC ATCGCCCAAC AACGCCGTCC AGTAACCGAC
CGCCCCGCGA TCGTCTGCCC GATCGACCCC CGTACCCAGC CGGAACGCCG CGACGAGATC
GCCCCGGGCA GCATGTTCCA CGACGACTGG GTCCGCCAAC GCCAACAAGG ACCCGTCGCG
ATCGTCCCAC CGGGCGAACG GGCCGACACC GCCTACCTGG CGGCCCGCGG CATCGACCGG
GTGGTCATCC CGAGATAG
 
Protein sequence
MTAALGTRYG ANYVPSSNWF YSWLDFSADA VRRDFDDLAS IGLDHVRVFP MWPWIQPNRG 
HIRTKPIRDL LTVIDIAAER GLDVAVDLLQ GHMSSFDFLP SWVLTHHHRS IFEDPDVRDG
IASYMSTLSR AVADKPNVFA ITLGNEVNNL VPFYSATPEA TRDWASGLLN VVAEAAPDVL
HLYSVYDASW YTPGHPFDPA DSTDLGSLTT VHSWVFSGAA AIDGPLGPAT VSHADYLIEL
AAATATDPAR PIWLQEVGAP QPHVPATDAG EFTTQTLAHI DSNPALWGVT WWCSHDLDRR
LLDFPEHEYD LGLFTLDHQP KPAARALERF IAQQRRPVTD RPAIVCPIDP RTQPERRDEI
APGSMFHDDW VRQRQQGPVA IVPPGERADT AYLAARGIDR VVIPR