Gene Snas_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1975 
Symbol 
ID8883167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2095613 
End bp2096212 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003510764 
Protein GI291299486 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.382484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.828211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGG CCACCCGAAA ACCCGACGCG TCCCGGCGCA GCCAGCGCTC CCGCGAAGCC 
ATCCTCACCG CGGCCATGGA GCTGATGGCC GAGGTCGGCT ACGCCAAACT CACCATCGAG
GCGATCGCGG CCCGCGCCGG AGCCGGGAAA CAGACCATCT ACCGGTGGTG GCCCACCAAG
AGCGCGGTGG TCCTGGACGC CTTCCGGCTC AACGCCGAGA CCCAGGAGGA CGAGGTCGAC
TTCCCCGACA CCGGCGACCT GGACGCCGAC CTCAGGATCG TCATGCGCGC CATCGCCGAC
GAGTGCAACA ACCCCCGCTA CGACGGCCCG GCCCGCGTCA TGATCGCCGA GGCCCAGCAC
GACCCCGAGT TCGGTGCCGA GGCCCGCGAG GCGTTCCTGC TGCCCGCCAT CACCGCCACC
AAGGAGCGGC TGCGGTCAGG CCAGCGGGCC GGGCAGCTGC GCGCCGACGC CGACCTGGAC
GTGGTGGTGG AGCTGCTGTT CGGCCCGATC CACCACCGCT GGCTGCATTC GACCGCGCCG
ATCACGCACG CCTACGCCGA CCAGATCGTC GACTACGTGC TGGCGGCCGT CAGGCCGTGA
 
Protein sequence
MTEATRKPDA SRRSQRSREA ILTAAMELMA EVGYAKLTIE AIAARAGAGK QTIYRWWPTK 
SAVVLDAFRL NAETQEDEVD FPDTGDLDAD LRIVMRAIAD ECNNPRYDGP ARVMIAEAQH
DPEFGAEARE AFLLPAITAT KERLRSGQRA GQLRADADLD VVVELLFGPI HHRWLHSTAP
ITHAYADQIV DYVLAAVRP