Gene Snas_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1939 
Symbol 
ID8883131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2060311 
End bp2061507 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content74% 
IMG OID 
ProductROK family protein 
Protein accessionYP_003510728 
Protein GI291299450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGT CCCACGCGGA CGCGGCGGGC CACGGTGGCT CGTCGCGTCT GCTGCGTCTC 
ATCAACGAGC GCACGGCACT GGGTTGCCTG TTCCTGCGCG ACCGGCTGAC CCGCCCGGAA
CTGGTCGAGC TGACCGGGTT CTCCAAGCCG ACGGCTTCGG AGGTGATCAA GCGGCTGCGG
GCGGCGGGGC TGGTGACGGT GGCCGGTCGC ACCAGCGGCG GACCGGGGCC GCGCGCCGAC
GTGTACGCGA TCGACGCGGA CGCGGCGTAC TCGGCGGCGG TGTCGCTGCG CGAACCCGAC
CGGCTCGACG TGGCGGTGGC GGACCTGCGC GGCGAGCTCC GTCGGACGGT GAAGTGCCCG
CTGGGCGACG ATCCCGAGGC GGCCGTGGTG GCGGCGGTGG CCGACGCGTG CGCGATGGCC
GAAGTGGACC GTGATCGACT GCGCAGTGTC TGGGTGGCGG TGCCGGGTTC CTACGACGGC
CGCGGCGACC GGGTCCGCAA CATCGACATC GAGGGACTGG AGACGCCGGG GCTGCGGCAG
CGGCTGGCCG AGGCGCTGGG CACCCCGGTG CGCATCGACA ACGACGTGAA CCTGGCGGCG
CTGGCCGAAC GCCACCACGG CGTGGGCGGC ACCGAGGGCT TCGCGCTGCT GTGGCTGGGC
GAGGCCGGTA TCGGCCTGGG CATCGACCTG GGTGACGAGG CCGGGGGCGG ACTGCTGCAC
GGCTTCAGCG GCGCCGCCGG TGAGATCGGG TATCTCCCCA TCGGAACGCC CTCGGCGGTG
GCGCCGCCGG ATCTGCAGGA ACTGGCGGCG GGCCCGGCGA TCGTCCGGCT GTCGCAACGG
CACGGCCGCG AGGTGTCCTC GGCGCGGTCG GCGATCGAGG TGGCCGAGAC CGCGGACGAC
GCGGAGTTCT TCGACGTGGT GGCGCGACGC ATCGCGATCG GACTGGCCTC GGTGGTGACC
ATCTTGGCCC CGGCGGTGAT CGTGCTGGCC GGGGAGATCG GCGCGGCCGG TTCGGGCAGG
CTCGGCGAGG CGGTCGGCGC CGCGCTGGCC AAACTCGGCT TCGGCACCCC CGTCAAACGC
ACCGCGGTCG AGGGGGACGC GGTGCTGCGG GGCGGCCTGG ACGCGGCCTT GGCGACGGTG
CGCCGTCAGC TGCTGGCCGA CCCGCTGGCC ACCGGTAACT CCGAGGGCGC CGCGTAG
 
Protein sequence
MSASHADAAG HGGSSRLLRL INERTALGCL FLRDRLTRPE LVELTGFSKP TASEVIKRLR 
AAGLVTVAGR TSGGPGPRAD VYAIDADAAY SAAVSLREPD RLDVAVADLR GELRRTVKCP
LGDDPEAAVV AAVADACAMA EVDRDRLRSV WVAVPGSYDG RGDRVRNIDI EGLETPGLRQ
RLAEALGTPV RIDNDVNLAA LAERHHGVGG TEGFALLWLG EAGIGLGIDL GDEAGGGLLH
GFSGAAGEIG YLPIGTPSAV APPDLQELAA GPAIVRLSQR HGREVSSARS AIEVAETADD
AEFFDVVARR IAIGLASVVT ILAPAVIVLA GEIGAAGSGR LGEAVGAALA KLGFGTPVKR
TAVEGDAVLR GGLDAALATV RRQLLADPLA TGNSEGAA