Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1916 |
Symbol | |
ID | 8883108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2031930 |
End bp | 2033183 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Acetylornithine transaminase |
Protein accession | YP_003510705 |
Protein GI | 291299427 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAGC TCTCCCCACT GCTCAAACAG GCAACTCCGG TCGTCGTCGA TCACGGCGAG GGCGTGTACC TCTTCGACTC CGACGGGCGC CGCTACCTGG ACTTCACCGC GGGGATCGGT GTGACCAGCA CCGGCCACTG CCACCCCAAG GTAGTGCAGG CGGCGCAGGA ACAGGTCGGC AAGCTGATCC ACGGCCAGTA CACCACGGTC ATGCACCAGC CGATGCTCGA ACTGACCAGG CGTCTGGGCG AGGTGCTCCC GCCCGGACTC GACTCGCTGT TCTACTCCAA CTCCGGCAGC GAGGCCGTCG AGGCCGCGCT GCGACTGAGC CGCCAGGCCA CCGGCAGGCC CAACGTCGTG GTCTTCCATG GCGGCTTCCA CGGCCGCACC GTCGCGGCCT CGACCATGAC CACCTCGGGC ACCCGGTTCA GCGCGGGCTT CTCGCCGCTG ATGTCGGGCG TGCACGTCGC GCCGTTCCCC AACGCCTACC GCTACGGCTG GGACGAGCGC ACCGCCACCG AGTTCGCGCT GCGGGAACTG GACTACCTGT TCGCCACGCT CAGCGCGCCC AACGAGACCG CCGCGTTCTT CATCGAGCCG GTGCTGGGCG AGGGCGGCTA CGTCCCGGCC AACACCGCGT TCCTGCAGGG CCTGCGCGAA CGCGCCGACG AGCACGGCAT CCTGCTGGTG ATCGACGAGA TCCAGACCGG CTTCGGCCGC ACCGGCAAGT TCTGGGGCCA CGACCACTTC GACGTCCGCC CCGACATCGT CCTGATCGCC AAGGGCCTGG CCTCCGGCTT CCCGATCTCG GGCATCGCCG CGTCCAAGGA ACTCATGTCC AAGGCGTGGC CGGGTTCGCA GGGCGGCACC TACGGCGGCA ACGCGGTGGC CTGCGCCGCC GCCCTGGCCA CTTTGGAGGT CATCCAGGAG GAGGGTCTGG TCGACAACGC CGCCGCCCGC GGGCTCCAGC TGCTGGAGGG CGCCCGCCAG ATCGGCGACA AGACCCCGGC CATCGGCGAC GTGCGCGGGC TGGGCCTGCT GGTCGGCTCG GAGTTCACCA CCCCCGACGG CAAGCCGGAC ACCGCCACCG CCCAGGCCGC GCAGAAGGAG GCCGCCGCGC GCGGCCTGCT GATGCTCACC TGCGGCGCCC ACATGAACGT CGTGCGTATG ATCCCGGCGC TGGTCGTCAA CTCCGAACAG ATCGACGAGG CGCTGGGCAT CTGGGCCGAC GTCGTCGCCG ACGTCGCCAA ATAG
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Protein sequence | MAQLSPLLKQ ATPVVVDHGE GVYLFDSDGR RYLDFTAGIG VTSTGHCHPK VVQAAQEQVG KLIHGQYTTV MHQPMLELTR RLGEVLPPGL DSLFYSNSGS EAVEAALRLS RQATGRPNVV VFHGGFHGRT VAASTMTTSG TRFSAGFSPL MSGVHVAPFP NAYRYGWDER TATEFALREL DYLFATLSAP NETAAFFIEP VLGEGGYVPA NTAFLQGLRE RADEHGILLV IDEIQTGFGR TGKFWGHDHF DVRPDIVLIA KGLASGFPIS GIAASKELMS KAWPGSQGGT YGGNAVACAA ALATLEVIQE EGLVDNAAAR GLQLLEGARQ IGDKTPAIGD VRGLGLLVGS EFTTPDGKPD TATAQAAQKE AAARGLLMLT CGAHMNVVRM IPALVVNSEQ IDEALGIWAD VVADVAK
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