Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1886 |
Symbol | |
ID | 8883078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1978297 |
End bp | 1980762 |
Gene Length | 2466 bp |
Protein Length | 821 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003510675 |
Protein GI | 291299397 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0637904 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGG CGATGCTGCG GGACCTGGCC GCCCACAAGG CGCGGGTCGC GATGACCCTG GTGGCCATCG CTTTGGGGGT GGCGGCGGTG GTGGCCAGTT GGATCGCGTC GGAGTCGATC CCGTCCGGCC TGGTCACCTC GCAGGTCAAC TCCCGTGTGG ACGTGTCGGT GCGCGGGGAG CTGTCCACCG CCCAGGTCGA GGCGTTGCGA CAGCTGCCCG GTGAGGCGAC GGTGGTGAGC ACGTTCCGGG CCGGGGTGGT CGCCGAAGAC GGCAAACTCG TCGACGCGAC GACCGTGTTC GACCACGCCG GAACCGGTTT CGACGACTCC GGACGGTTCG ACCTGAAGGC GGGCAAGGCG CCCAGCGGTG GCGACGAGAT CGCGCTGCGG GCCGCCGAGG CGAAGTCGGC CGGGCTGCGG GTCGGCGATG CCGCCTCGAT CCTGTTGGCC GACGGGGAAC GGGTGGAGCT CAAACTCACC GGCGTGTACG ACTACCGGCC GCTGTGGACG GATGACAAGG ACCCGGCGCC GGTGGTGGCC TTCGGCGACG CGTCCGGCGT GGATGCCACG GTGGCGCGGG TCGACCTGAC CGGCGGTGCG GGACTGGAAT CGACCGCCGT GGACGCGGTG CGCGAGAACG CTTCGGACTC GATCGGCCGA CGTGTCGAGG TCGCCGACGC GCGCGAACTG GCCGAGGCCA CCCGCGCCGA ACTCGCCTCC GACCTGTTCG ACCTGCGCAT GATGCTGCTG CCGTTCGCGG GCCTGGCGCT GCTGGTGGGG ATGTTCATCA TCGCCAACAC CTTCGCCATG CTCGTCAGTC AGCGGACCCG GCAGCTGGCG CTGCTGCGCG CGGTCGGCGC CAAACGCGGC CAAGTGCGGC GGACGGTACG GCTGGAGGCA CTGGTGCTGG CGGTGGTCGG CGGAACGATC GGGACGCTGG CCGGGATCGC CGCGGCTCCC GCTCTCATCG GGATGAACTC CAGCGAGCAG GTGCCGCTTG TGGTGTCGCC CTGGGGAATC GCGGTGGGGC TGGGTTGTGC CGTCGCGGTC ACGGTTCTGG CCTCGGCCGG TGCCGCCCGC AAGGCCGCGT CGGTGGCGCC GATGGCGGCG CTGCGGGTCG CGGCCCGGAC CGCCACCCAG ACCCGTGGGC GTCGTGTCTA TATCGGACTC GGGCTGTTGT TGGCCTCGGT GGTGACGGTC GGGGTCACGG CCGATCCCAC GGCGGGAACG ACGAAGCGGG TCATCGCGAT GTGCGCGGCG GGACTGGGCG CGGTGGCCGT GCTGGTGCTG GCCCCGAGTC TGCTCAACCT GGTGCAGCGG CCACTGCGGG CGCTGGCGGG ACGCTCGGGA CCGGCCGCGC GGTTGGCGAT GCGTTCGGCC GCAGCCGATC CGCGCCGCAC CGCCGGGACA TCCGGGGCCA TCACGATCGG GCTGATCCTG GTGTGCGCCT TCGCGACCCT GAACGCGACG CTCGGCGACC TGATCGCGTC GACCGTTCGC GACGGCGTGC CGACCTCGAC GACGGTGCTG GAGGCGGCGG GCGGTCAGGG CGCGACCCTG ACCCGCGACG AGGTCGACAA GGCCAAGGCC GTCGCGGGCG TGTCCATGGT GGAACCCGTC AGTCAGGCGA TAGCCACACT GGAGTACCCG GGCGGTTCGG CGCGTCGCAA CGTCTCGGCC GTCGATCCCG AGGCGCTGGG GACGGTACTG ACTCCGAGGA TCACCGAGGG CAGCGACGAC CTGCGCGAGG GCTTCGTCAT CGCGCAGAAC CAGGCCACCA CGCTCGGCCT GGCGGTGGGG GACCGGCTGA CGGTTCGGCT GGAACTCGGC GGCGAGATCA CGGCTCGCGT CGCCGGGGTC TACGAGGCCA CCGAGTACTC CGCCAGTGTC TATGTGGATG CCGACCGGGT GCCGGAGAAG GCGCGGGAGG GCATCACCGG CGTCTATGTC ACCGGAGCCG ATCCGGCGGC GGTGAAGTCG GCGCTGCGCG ACACCTTCGC CGAACGTCCG GACGTTCGGG TCTCGGACCA GCGCTCGCTG GTGGCCGAGG CTGTCGAGCG GCAGCGGATG GCGTTCGTGG CCTTCTACGC GATGTTCGGG CTGGCGCTGC TGATCGCGTT GTTCGGCGTG GTCAACACGC TGACGTTGTC GGTGATGGAG CGGATCCGTG AGCTGGGGGT GCTACGGGCG ATCGGCGCGA ACGCGAAGCT GGTGCGGCGG ATGGTGCGGG TCGAGAGCCT GGTGATCGCG CTGTTCGGTT CGGTGCTGGG CATCGTGGCC GGAGTGGGCG TGGGCGCGGT GATGCAGCAA GCGATGTTGG GCCAAGCACT GTGGACGTTC ACGGTGCCGT GGGATGCCGT CGGGCTCAGC CTCGTGGGGA CCGTGGTCGC GGCGGTGCTG GCGGCGATCT GGCCCGCGCG TCGTGCCGCC CGAGCCGATC CACTGGCGGC GATCGCCGCC GAGTGA
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Protein sequence | MRKAMLRDLA AHKARVAMTL VAIALGVAAV VASWIASESI PSGLVTSQVN SRVDVSVRGE LSTAQVEALR QLPGEATVVS TFRAGVVAED GKLVDATTVF DHAGTGFDDS GRFDLKAGKA PSGGDEIALR AAEAKSAGLR VGDAASILLA DGERVELKLT GVYDYRPLWT DDKDPAPVVA FGDASGVDAT VARVDLTGGA GLESTAVDAV RENASDSIGR RVEVADAREL AEATRAELAS DLFDLRMMLL PFAGLALLVG MFIIANTFAM LVSQRTRQLA LLRAVGAKRG QVRRTVRLEA LVLAVVGGTI GTLAGIAAAP ALIGMNSSEQ VPLVVSPWGI AVGLGCAVAV TVLASAGAAR KAASVAPMAA LRVAARTATQ TRGRRVYIGL GLLLASVVTV GVTADPTAGT TKRVIAMCAA GLGAVAVLVL APSLLNLVQR PLRALAGRSG PAARLAMRSA AADPRRTAGT SGAITIGLIL VCAFATLNAT LGDLIASTVR DGVPTSTTVL EAAGGQGATL TRDEVDKAKA VAGVSMVEPV SQAIATLEYP GGSARRNVSA VDPEALGTVL TPRITEGSDD LREGFVIAQN QATTLGLAVG DRLTVRLELG GEITARVAGV YEATEYSASV YVDADRVPEK AREGITGVYV TGADPAAVKS ALRDTFAERP DVRVSDQRSL VAEAVERQRM AFVAFYAMFG LALLIALFGV VNTLTLSVME RIRELGVLRA IGANAKLVRR MVRVESLVIA LFGSVLGIVA GVGVGAVMQQ AMLGQALWTF TVPWDAVGLS LVGTVVAAVL AAIWPARRAA RADPLAAIAA E
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