Gene Snas_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1864 
Symbol 
ID8883055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1956331 
End bp1956777 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510653 
Protein GI291299375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00461724 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.158626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGCG GACAGCTGAT GTCCGAGGCG ACCAGGCGGC TCGGACCGTT CTGGACGATG 
ACCCGCAGCC AGGTGTACCG GGAACTCCCG GCACTGGCCG AAGTGGGCTA CGTCCGGGTC
GGTAAGCCGG GCCCGCGCGC GAGCGTCCCG TACACCATCA GCGCGTCCGG AAAGCGCGCC
TTCGCGAAGT GGATCAATGA GGAGAGCGGC ATCGGCCAGC TGCGCGACCC CGTCGCGCTG
CGCACCGCGT TCGCCCACCA CATGACCCCG TCGGCGCTGT CCGATATGTA CAAGGACGCC
ATCGAGTACC ACAACGAGGC GCTCAACGAC GTCAAGAACC GTGCCAAGGA CCTGGCCGCC
GACGACGCCG GTGCCGCCAC GGCGATGGAC TTCGCCATCG GCTACCACAA GGCCGCCATC
ACCTGGCTGA AGTCGCGCCA GAAGTAA
 
Protein sequence
MTGGQLMSEA TRRLGPFWTM TRSQVYRELP ALAEVGYVRV GKPGPRASVP YTISASGKRA 
FAKWINEESG IGQLRDPVAL RTAFAHHMTP SALSDMYKDA IEYHNEALND VKNRAKDLAA
DDAGAATAMD FAIGYHKAAI TWLKSRQK