Gene Snas_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1819 
Symbol 
ID8883010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1908031 
End bp1908900 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content71% 
IMG OID 
Productmethylenetetrahydrofolate reductase 
Protein accessionYP_003510608 
Protein GI291299330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.630675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA GCGCGGCTCT GTCCCGCGTC CGCATGAGAC GGACGGCCAG CCGGCTGCTG 
GCTGAACCCC GCTTCGAGGT GCTGCCGCTG GAGAGGGTGG ACCGGGAGGT GGCCGCGCTG
CCGCGCGGCA CCACGGTCAC CATCACCGCC TCCCCCTCCC GCGGCACCAT GGCCACCGTC
GAGACCGCCG AGCGGTTCGC CGCCCTGGGT CTGCGGCCGG TGCCGCACCT GTCGGCGCGC
GGCATGCGCG ACGACGCCGA ACTCGTGGAA GTGGTGCAGC GCCTGGACCA CGCGGGCATC
CGGGACGCCT TCGTGGTCGG GGGCGACGCC TCGTCGGCCT CGGCGGTGTT CCCCGACGGC
CTGGCGCTGC TTCAGGCCAT GGACGACATC GGCCACCGGC TCCACGACAT CGGCATCCCG
GCCTATCCCG AAGGCCATCC GTCCATAGAC GACGACACCC TGTGGGCAGC GCTGGCGGCC
AAACGCCGCT ACGCCACCTA CGCGGTGACG CAGCTGTGCT TCGACGCCGA GGCCATCTGC
CGCTTCACCG TCCAGGCGCG ACAACGCGGC TTCGACCTAC CGATCCTGGC CGGGATCCCC
GGAGCCGTCG ACACCGCGAA ACTGCTGCGG GTCGGGCTGC GCATCGGCAT CGGCGACTCG
CTGCGGTTCG TGCGCGGCAA CCGGAGTGTG CTGCGCAAAC TGCTGCGTCC CGGTGGTTAC
CGTCCCGACG GGCTGGTCCG GAAGCTGGAC GGCCGCGTCC GCGACGGCCG CTGCGAACTG
GCCGGGGCGC ACATCTACAC GTTCAACGAC GTCGCCGCGA CGGCGCGTTG GCTCAAGGGG
AGGACAGCCG TATATGACCA TGCCCAGTGA
 
Protein sequence
MSMSAALSRV RMRRTASRLL AEPRFEVLPL ERVDREVAAL PRGTTVTITA SPSRGTMATV 
ETAERFAALG LRPVPHLSAR GMRDDAELVE VVQRLDHAGI RDAFVVGGDA SSASAVFPDG
LALLQAMDDI GHRLHDIGIP AYPEGHPSID DDTLWAALAA KRRYATYAVT QLCFDAEAIC
RFTVQARQRG FDLPILAGIP GAVDTAKLLR VGLRIGIGDS LRFVRGNRSV LRKLLRPGGY
RPDGLVRKLD GRVRDGRCEL AGAHIYTFND VAATARWLKG RTAVYDHAQ