Gene Snas_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1818 
Symbol 
ID8883009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1906789 
End bp1908000 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content64% 
IMG OID 
Productglycine cleavage T protein (aminomethyl transferase) 
Protein accessionYP_003510607 
Protein GI291299329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGA CAATGAATCC CGCGGCAGCC CTCACGTCCA GCGCGGCTGT CCTCAATCCC 
GAGATCATGC TGTACACGCG ACTGCGCAAG TCGCCCTACT TCTGGAAATC CCGCGAACAC
GGCGTGGCTA TGTACAGTGT GTACAACCAC ACCTATCATC CCCGGCACTA CGGTGACCCG
GTCGGCGAGT ACTGGTCGCT GCTCAACGGC GTCACCATCT GGGACGTCGG CGTCGAACGC
CAGGTGGAGA TCTCCGGCCC GGACGCCTTC GCGTTCACCA ACATGCTGGT GCCGCGCGAT
CTGTCCAAAT GCAAGGTCGG GCAGTGCAAG TACGTCTTCA TCACCGCTCC CGACGGCGGC
ATCATCAACG ACCCGGTGCT GCTTCGCCTT GAGGAGAACC GGTTCTGGCT GTCGCTGGCC
GACAGCGACG TCGAACTGTG GGCACTGGGC CTTGCCCACG CGGGCGGCTG GAACGTCGAG
ATCAAGGAGA TCGACGTGGC CCCGATCCAG ATCCAGGGCC CGAAGTCGCG CGAGCTCATG
ATCGACCTGT TTGGTAAATC CATTCTGGAC CTGCCGTACT ACTATCTCAA CCACTACACC
TTGAACGGCA TGGAGGTCGT CGTCAGCCGT ACCGGCTACA CGGCCGAGAT CGGCTACGAG
ATCTACCTGT ACAACGCCGA CCACGACGCC GGGAAACTGT GGGACACGGT GTGGCAGGCC
GGGGAACCGC ACGGACTGCG CCCGGTCGGG CCCTGCCACA TCCGGCGCAT CGAGGCCGGG
ATGCTGGCCT ACGGCTGCGA CATCACCCGC GACACCAATC CCATGGAGGT CGGCTACGAC
TACAAGTGGA TGGTCGACGT GGACCAGGAG TCCGACTTCA TCGGCAAGGC CGCGCTCAAA
CGCATCCGCG ACGAGGGCAT CAGCCGGATC ATGTGCGGCG TCGAGATCGA CGGCGACCCG
TTGGGCAGCT ACAACGACGG CTCCATGATC GACAGGTTCG CCGTGTACTC CGGCGACGGC
GGCAAGGTCG GTGAGGTCAC CAGCGCCTGC TACTCGCCGC GCCTGGAACG CAATATCGGC
CTGGCCATGC TCGACATCGG ACACAGCGAA CTGGGAACCA AGGTCGGCAT CGTGACGCCC
GGCGGTCCGC GCGGCGGCGT CGTGGTCCCC AAGCCGTTCA TCGACCCGCG CAAGGAAACC
CCGAAGGGGT GA
 
Protein sequence
MSQTMNPAAA LTSSAAVLNP EIMLYTRLRK SPYFWKSREH GVAMYSVYNH TYHPRHYGDP 
VGEYWSLLNG VTIWDVGVER QVEISGPDAF AFTNMLVPRD LSKCKVGQCK YVFITAPDGG
IINDPVLLRL EENRFWLSLA DSDVELWALG LAHAGGWNVE IKEIDVAPIQ IQGPKSRELM
IDLFGKSILD LPYYYLNHYT LNGMEVVVSR TGYTAEIGYE IYLYNADHDA GKLWDTVWQA
GEPHGLRPVG PCHIRRIEAG MLAYGCDITR DTNPMEVGYD YKWMVDVDQE SDFIGKAALK
RIRDEGISRI MCGVEIDGDP LGSYNDGSMI DRFAVYSGDG GKVGEVTSAC YSPRLERNIG
LAMLDIGHSE LGTKVGIVTP GGPRGGVVVP KPFIDPRKET PKG