Gene Snas_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1801 
Symbol 
ID8882991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1892506 
End bp1893267 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content68% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003510590 
Protein GI291299312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAA CGCTGCACGC CCTCGAGTAC TGGTGGATGA ACTACCGCCG GGTCTGGTAC 
GGCTCGGTGT TCTCCAGCTT CGTCATGCCG GTGCTGTTCC TGGTGAGCAT CGGCTACGGC
GTCGGCTCCT ATGTGGGCTC CACCGAGTCG TTGGGCGGCG TCGACTACGC CGCCTTCGTC
GCGCCCGGCC TGCTGGCCTC CACCGCGCTG CAGATGGTCG GCGGCGAGAT GACCTGGCCG
GTGTTCGCCG CGCTGCGCTG GGGCCAGCAG TACAAGGCCA TGCAGACCTC GCCGCTGACG
CCGCGCCAGA TCCTGTCCGG GCACCTGCTG TACGGGCTGA TCCGGGTCGC CGTCACCGCG
ATCGTGTTCG CCGTCGTCAT GGCGGCCTTC GGCATCTTCT CGGCCACCGC GCCGCTGTCG
GTCGTGGCCA CCATCGGCGT CGGCTACGCC TTCATCGGCT GGGTCTACGC CTTCTCCGTG
TCGGTCAAGA GCGAGACGAC GCTGTCCATC ATCCACCGGT TCGGGATCGT GCCGGTCAGC
CTGTTCTCCG GGGTGTTCTT CCCGCTGTCA CAGCTGCCGG CCTACCTGCA ACCCCTCGCC
TGGATCTCTC CACTGTGGCA CGGCGCCGAG CTGTCCCGGT GGGCGGTCTC GGGCACGCCC
ACCCCGTGGC CCTGGTACCT GCACATCGCC TACCTGCTCG TTTTGGGCAC GGTCGGCTGG
TGGCTGGCCG GAGCCCAGCT GCGACGCCGC ATGACGTCCT AG
 
Protein sequence
MIGTLHALEY WWMNYRRVWY GSVFSSFVMP VLFLVSIGYG VGSYVGSTES LGGVDYAAFV 
APGLLASTAL QMVGGEMTWP VFAALRWGQQ YKAMQTSPLT PRQILSGHLL YGLIRVAVTA
IVFAVVMAAF GIFSATAPLS VVATIGVGYA FIGWVYAFSV SVKSETTLSI IHRFGIVPVS
LFSGVFFPLS QLPAYLQPLA WISPLWHGAE LSRWAVSGTP TPWPWYLHIA YLLVLGTVGW
WLAGAQLRRR MTS