Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1795 |
Symbol | |
ID | 8882985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 1882078 |
End bp | 1883958 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | von Willebrand factor type A |
Protein accession | YP_003510585 |
Protein GI | 291299307 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGATCCC CCAACACCCG CCGCGTCCTG AGGCTCGCGG CCACGACGGT CATCCTCGGC GGTTTCGCCG TCGTCGGCAC CGCCGCCCCG GCGTCGGCGG CCGACAACGA CGGCGAGCTG CTCATGGCGC TGGACGCCTC GGGTTCCATG GAGGAATCCG ACGGCGCCGG GAACACCAAG ATGGAGACCG CCCGCGACGC CGTCATCGAC GTCGCCGAGG CCATGCCCGG CCACGCCAAG GTGGGACTGC GCGCCTATGG GCCGGCGTCC ACCGGCTCCG GCTGCAAGGC CAGCAAGGAA CTGGTGCCGA TCGACAAGAT CGACGCCGAC GCGATCACCA CCGCGGCCAC CGAGCTCAAA CCCGAGGGCG ACACCCCGAT CGCCTACTCG CTGGAAAAGG CCGCGGGCGA CTTCACCGAA GCCAAGGGCC CCAAGACGAT CCTGCTGGTC TCCGACGGCG AGGAGACCTG CGGCGGCGAC CCGGTCAAGG TCGCCGAGAA GATCGCCTCC CAGGGAGTCG ACCTGCGGGT CCACGTCATC GGCTTCCAGG TCGACGACGC CACCCGCAAA CAGCTGACCG AGATCGCCAA GGCCGGCAAG GGCTCCTACT ACGACGCCCA GGACGGACCG GCGCTGGCCA GCCGCCTCAA GCGCGCCAGC GAGAGCGCGC TGCGTCCATA CCAGACCACC GGCACCCAGA TCGACGGCTC CGACGACGGG CTCAACCCGC CGTCGCTGAA GCCGGGCCAG TACCTGGACT CGTTGGGCCC CAACGCCAAG GGCGAGGAAC CCAGCAAGTA CTACTCGTTC ACGCTCGAAA AGGGGTCCAA CGCGTACGTC GCGGCCACCA TCCCGTGGAG CACTCCACTG GAGACCGATG CCAAGAACGA CGTGTACGTC AAGGTGTCCA CCAAGGACGG CTCGCTGTGC GAGTCCGACT CCGGGTACAG CAAGCCCGAC GGCGGCGGCA GCGCCATCGC CACCGCGACG CCGGTGCTGG CCTTCGACCC CGAGGCCGAC AAGGGCCAGT GCGGGGCGAC CGGTGACTAC GTCGTGGAGG TCAACAACAA CGGCTCCACC GACCGCACCG GCGAGGCGCC GCTGGAGCTG GTCTACGTGC AGGAACCCGC CGCCAAGGCC ACCGGCAAGC TGCCCGAGGC CTACACCGAG GAGTCGGAGA CCGGCGTGAA GCCGGACGTG GACGGCAAGC CGACCAAGAT CACCGGCGCC GGAGGCATGA GCGACGCCCC GGTCACCGAG TCCGGTGTGT ACTCCGACGT GCTGCGTCCC GGCGAGGAGG TCTTCTACCG GGTGCCGGTC GACTGGGGAC AGCAGGTCGC CTACCAGATC GACCTGCCGA AACTCAACGC GGAGAACGAC AAGCGACTGG GCACCGGCAC CCCGGTGAGC ACCACGATCG TCAACCCGGT GCGCGAGGAG GCCACCCAGA CGGCCAACCA GGACATGTCG TACTACACCG GCGACCCTGA CACAGTGGAT GGTTCCACGG CTCCGGTGCG CTACCGCAAC CGCAACTCGG ACAACATCGA AGTGTCCAAC ACGTCGATCT CGGGCTACTA CTACATCTCG GTGCGGATGC AGGCCGATGT GGAGGACCCG TACTTCGAAC TGCCGATCAC CCTCAAGGTG GACGTCAAGG GCAAGACCGG CGGTGAGCCT AAGTACGACG ACCCCGCCGA CCTGGGCACC CCGGCCGAAC AGCTGGAGGT CAAACAACTG TCCAGCGAGG GCGGCAAGGA CAAGACCCTG ACCGGGGGCT CCACGACGCT GCTGTGGATC GGCATCGGCG TGGGAGCGGT GCTCGTCCTC GGCGGTGGCG GCACGGCCTG GATGATGGTG CGCCGCAGGC CAACAGCTTG A
|
Protein sequence | MGSPNTRRVL RLAATTVILG GFAVVGTAAP ASAADNDGEL LMALDASGSM EESDGAGNTK METARDAVID VAEAMPGHAK VGLRAYGPAS TGSGCKASKE LVPIDKIDAD AITTAATELK PEGDTPIAYS LEKAAGDFTE AKGPKTILLV SDGEETCGGD PVKVAEKIAS QGVDLRVHVI GFQVDDATRK QLTEIAKAGK GSYYDAQDGP ALASRLKRAS ESALRPYQTT GTQIDGSDDG LNPPSLKPGQ YLDSLGPNAK GEEPSKYYSF TLEKGSNAYV AATIPWSTPL ETDAKNDVYV KVSTKDGSLC ESDSGYSKPD GGGSAIATAT PVLAFDPEAD KGQCGATGDY VVEVNNNGST DRTGEAPLEL VYVQEPAAKA TGKLPEAYTE ESETGVKPDV DGKPTKITGA GGMSDAPVTE SGVYSDVLRP GEEVFYRVPV DWGQQVAYQI DLPKLNAEND KRLGTGTPVS TTIVNPVREE ATQTANQDMS YYTGDPDTVD GSTAPVRYRN RNSDNIEVSN TSISGYYYIS VRMQADVEDP YFELPITLKV DVKGKTGGEP KYDDPADLGT PAEQLEVKQL SSEGGKDKTL TGGSTTLLWI GIGVGAVLVL GGGGTAWMMV RRRPTA
|
| |