Gene Snas_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1780 
Symbol 
ID8882970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1865355 
End bp1866566 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content69% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003510570 
Protein GI291299292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.41734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.860702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCG TCCTCAAGCG CCCCGACTAC CGACTGCTGT TCATCGGCAC CTCCGCCAGC 
ATCATCGGCG ACACCCTGCT GTTCCTCACC CTGGGTATCT GGGTCAAGGA CCTCACCGGC
TCCGACGGCG CCGCCGGGCT GACGATGTTC TTCCTGGGCG CTCCGATCCT GCTGGCGCCG
TTGGCGGGCA TGCTCGTCGA CCGGGTGAAG TTCCGGCCGT TCCTGATCTG GGCCAACATC
GGCAACGCCG TGGTGCTGCT GCCACTGGCC TTCGTGTCCG GCCCCGACAC GGTGTGGCTG
ATCTACCTGG TGGCGGTGCT GCTCGGCCTC GGATCGATCC TCGACTCGCC CGCCCTCAAC
GGCCTGCTCA AACTGCTGTT GCCCGAGGAC CTGTTCGTGG AGGCCAACGG CGCCACCCAG
ACCGTCAAAC AGGGCCTGCG GCTCGTCGGC CCGATCGCGG GCGCCGGAAT CTACCTGGCG
CTGGGCGGAT TCGCCGTCGC GCTCATCGAC GCGGCCAGCT TCCTGGTCGC GGCGGGCGCC
ATCGCCCTGC TCAAGGTGCG ACAGTCCACA CGCGAACCGC GACGCTCGCA CTGGATCACC
GAGATGACCG CCGGATTCCG GTTCATCGCC GCCGAGGGCG CGCTGCGGCG GGCGATCACC
GGTCTGTTCA TCGCCGCGGC CGGACTGGGC GCCATCGAGG TCATCGGCTT CGCCCTCAAC
GACAAGGGCC TGGGCATGGA ACCCGCGTTC ATCTCGGTCA TCGTCACCGT CATGGGCGTC
GGCGGCCTGA CCGGCGGCGT CTTCGCGGCC CGGTTCGTCA AGAAGGTCGG CGAACTGGCC
GCCGAGGCCG TCGGCCTGTT TGGGCTGGCG GTGACCTTCG CGGTGTGGGC GGTGCCCACC
CTGCCGGGCG TGCTGGCCGC CGCGGTGCTG GGCGGCTTGG CGATCCCGGT GGTGATGGTC
GCCGACAACA CCCTGATCCA GAAGCGTTCC CCGCACGAGC TGATCGGCAG GGTCTCGGCC
GCCTGCGACC TGTGTTACGC GGTGCCGCAG CTGGCCTCTC TGGCCACCGG CGCGCTATTG
GTAACCATAG TGGACTATCG GATCATCCTG GTGGTCATGG CCGTGCTGAT GACGATCGCG
GGTGCCTACA TGTTCGGCGG CCGCAAGCTC ACCAGTCCCG CCGCGCCTAA AGTGACCGTC
GCCGAGGCGT GA
 
Protein sequence
MLTVLKRPDY RLLFIGTSAS IIGDTLLFLT LGIWVKDLTG SDGAAGLTMF FLGAPILLAP 
LAGMLVDRVK FRPFLIWANI GNAVVLLPLA FVSGPDTVWL IYLVAVLLGL GSILDSPALN
GLLKLLLPED LFVEANGATQ TVKQGLRLVG PIAGAGIYLA LGGFAVALID AASFLVAAGA
IALLKVRQST REPRRSHWIT EMTAGFRFIA AEGALRRAIT GLFIAAAGLG AIEVIGFALN
DKGLGMEPAF ISVIVTVMGV GGLTGGVFAA RFVKKVGELA AEAVGLFGLA VTFAVWAVPT
LPGVLAAAVL GGLAIPVVMV ADNTLIQKRS PHELIGRVSA ACDLCYAVPQ LASLATGALL
VTIVDYRIIL VVMAVLMTIA GAYMFGGRKL TSPAAPKVTV AEA