Gene Snas_1711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1711 
Symbol 
ID8882901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1801719 
End bp1802378 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content71% 
IMG OID 
ProductHAD-superfamily hydrolase subfamily IA, variant 1 
Protein accessionYP_003510503 
Protein GI291299225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0940062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.274415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCA CGCATGTCGT GTGGGACTGG AACGGAACCC TGTTCGACGA CGCCCGCGCG 
CTGATCGACA CCACCATCGA GGTCTTCGCC GAGCTCGGCC TGCCCGCGGT GACCGTGGAG
CGGTATCAGG CGGTGCACAC CCAGCCGATC GACGAGTTCT ATCGCAGGTT GCTGGGCGGG
CTCGTGGACG GGGAGCTGCT GCGGCGGATC CACGCGCGGT TCGAGGTGGC ATACGCCCGG
CGCCGTCCGG GGCTGGCCCT GACCGCCGAC ACGGTCGCGG CGCTGGAGTC GGTCGAGGCC
AGCGGCCTGT CGCAGTCGGT GTTGTCGATG CACCCGCACG ACCGGCTCAC CGCGCTGGTG
GAGCGGTTCG GTATCGCTGG GCGATTCGTC CGCGTCGACG GGCAGCGCGG CGCCGACGCC
GGGTTCAAGG CCGCGCACCT GGCCGGACAT CTGGAGCGGC TCGGGTTGAG TGGCGAACGG
GTGCTGGTCG TCGGGGACAG TGTGGACGAT GCCGCCGCTT CCGAGGACGT GGGCGCGCGG
TGCGTGCTGT ACCGCAGCGG CCTGCACAGC GTCGAGGCGT TGCGGCGAGC AGATGTTCCG
ATCGCCGACA CCCTGCGCGA GGCACTGACG CTGGGGCTGC GGAAGGCCGG GGCGGTATGA
 
Protein sequence
MAITHVVWDW NGTLFDDARA LIDTTIEVFA ELGLPAVTVE RYQAVHTQPI DEFYRRLLGG 
LVDGELLRRI HARFEVAYAR RRPGLALTAD TVAALESVEA SGLSQSVLSM HPHDRLTALV
ERFGIAGRFV RVDGQRGADA GFKAAHLAGH LERLGLSGER VLVVGDSVDD AAASEDVGAR
CVLYRSGLHS VEALRRADVP IADTLREALT LGLRKAGAV