| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1678 |
|---|
| Symbol | |
|---|
| ID | 8882868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 1770179 |
|---|
| End bp | 1770679 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_003510471 |
|---|
| Protein GI | 291299193 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000210474 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.105079 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCAGAG CTCTGATTCT CATCGATCTG ATGCCGCGCA TCATCGCGCT GCCGCTGGCG
CCCTATTCCG GGGACGCGGT GCTGCGCAAC TGCCTGCGGC TGGCGGAGTC GTTCCGGGCC
ACCGGGGAGC CGGTGGTCGC GGTGCGGGTC GATCGGCCCA ATGTGGATGA ACAGCCGCCG
GGCAGCGGTT TCGCCACCGG GGTCACGGTT CCCGGTGACG TCACGATCGT GAAGCGGACG
ATCGGCGCCT TCCACAACAC CGAGCTGGAC GCCGAGCTGC GGCGCCGCGA CGTGGACACC
GTGGTGATGG CGGGCCTGGT GACGAACATG GGCGTCGAGT CCACCGCCCG GGCCGCGTCC
GACCACGGCT ACGAGGTGGA GTTCGTCGCC GACGCGATGT CGGGGCTGGC CAAGGACGAG
CACAAGTTCG CGGTGGGCAA GGTGTTCCCG CGTTTCGGCG AGGTGCGCAC CGTGGCCGAC
TACCTCGGTT CGGAGGCGTA G
|
|---|
| Protein sequence | MTRALILIDL MPRIIALPLA PYSGDAVLRN CLRLAESFRA TGEPVVAVRV DRPNVDEQPP
GSGFATGVTV PGDVTIVKRT IGAFHNTELD AELRRRDVDT VVMAGLVTNM GVESTARAAS
DHGYEVEFVA DAMSGLAKDE HKFAVGKVFP RFGEVRTVAD YLGSEA
|
|---|
| |