Gene Snas_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1670 
Symbol 
ID8882860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1761509 
End bp1762726 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510465 
Protein GI291299187 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.704713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.19338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGA CACTTCCGCC ACCGGCCGCC CACGCCGCCC GCGGCCCGGT GCGAGCCCGC 
GAACGCGCAC TGGCGCCCGA CCTGGCCCGC GGCTTCATGC TGCTGTTCAT CGCGCTCGCC
AATGCCGGTG GCGTGGTCTT CGCGGCCACC GAACCCGCCA TCGAACCGAC ACCGCACGGC
TTCGAGAGCG TCGTCAACTT CGGCATGATG ATGTTCGTCA GCGGGCACGC GTACCCGATG
TTCGCCGTCA TGTTCGGCTA CGGCTTGGTC CAGATGTCCC GCCGCCAGCG GGAAGCGGGC
GCCAGCACCG CCGCGGCACG CGACACCCTG GTGCGCCGCA ACGCCTGGCT CATCGCCTTC
GGTGCGGTGC ACGCCGTGCT GCTGTACTTC GGCGACTTCC TCGCCGCCTA CGGGCTGGTC
GGCATCATCG CCGCCTGCCT GCTGCTCAAC CGTGGCGACA AGTTCCACCG CGTCATCGTG
TGGCTGTGGG GCCTGGTTCT CGTCGAGGCC GCCGTCTTCA TGGCCCTGGT GTACCCGAGT
CTGAGCACCG ACTTCGGCGC GACCCCGAAG CCCGCCCGCG TCGACTCGCT GGCGGCCACC
AGCTACGGGG AGTCCCTTGT CGACCGGCTC GCCGAGTGGC CGCTGCACAC CGCGTCCGTC
CTGGGCTTCA TCTTCATCGT GTGGCTGGGC ATGTGGGCGG CCCGCCGCCG CGTGCTGGAG
GAACCGGCCC GCCACCGTCC GCTCCTCATC GGTGCCACCG TCGTGGGGCT TGGCGTCGGC
TTCCTCGGTT CGCTGCCGCA GGCGCTGGTC AGTGCCGGAG CACTGTCGAC GGACAACGCC
GACCTGACGC TGCTGTTGCA CAACCTCGGC GGCATGTACT CCGGACCCGG CTACGTCGCG
GCCTTCGGCC TTATCGCGCT GTGGCTGACG AAGAACCGCG CCGCCCCCAC CGACACCCTC
ATCACCGGAT CGCTGGTGGC GCTGGGCCGC CGCTCGCTGT CGGGGTACCT GTTCCAGTCG
GTGTCGTGGT TCGTCCTGCT GCTGCCGTTC ACGTTCGCGA TGCCGCAGTG GTTCGGCAAC
AAGACGCTGC TGTACCTGCT CGTCGCCACC GCGACCTGGC TGGCCACAGT GGTGACAGCG
GCGGCGCTGC AACGCCGCGG CCACCCCGGC CCGGCTGAGG CCCTGCTGCG CCGCCTCGCC
TACGGCCCCC GCCGCTGA
 
Protein sequence
MSQTLPPPAA HAARGPVRAR ERALAPDLAR GFMLLFIALA NAGGVVFAAT EPAIEPTPHG 
FESVVNFGMM MFVSGHAYPM FAVMFGYGLV QMSRRQREAG ASTAAARDTL VRRNAWLIAF
GAVHAVLLYF GDFLAAYGLV GIIAACLLLN RGDKFHRVIV WLWGLVLVEA AVFMALVYPS
LSTDFGATPK PARVDSLAAT SYGESLVDRL AEWPLHTASV LGFIFIVWLG MWAARRRVLE
EPARHRPLLI GATVVGLGVG FLGSLPQALV SAGALSTDNA DLTLLLHNLG GMYSGPGYVA
AFGLIALWLT KNRAAPTDTL ITGSLVALGR RSLSGYLFQS VSWFVLLLPF TFAMPQWFGN
KTLLYLLVAT ATWLATVVTA AALQRRGHPG PAEALLRRLA YGPRR