| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1611 |
|---|
| Symbol | |
|---|
| ID | 8882800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 1700586 |
|---|
| End bp | 1701191 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | chitin-binding domain 3 protein |
|---|
| Protein accession | YP_003510407 |
|---|
| Protein GI | 291299129 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0398981 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCCC CCCGTACCGT CCGCGTCGGT ATCTCGGTAC TCGCCGGGAC CGCCGCCGCG
GTCATGCTCA GCGTGCTGGG CGCCTCCCCG GCCTCGGCGC ACGGATACAC CACCTCACCC
ACCAGCCGGG CGGCGTTCTG CGCCGACGGC ACCGTCACCG ACTGCGGCCA GATCCAGTGG
GAGCCGCAAA GCGTCGAAGG ACCCAAGGGC TTCCCGGCCG CGGGTCCGCA GGACGGTTCC
ATCTGCGCCG GCGGAAACGG CCAGTTCGCC GAACTGGACG ACCCCCGGGG CGGCCAGTGG
CCCGCCACCG ACGTGCAGCC CGGAGGTTCG ATGAACTTCC AGTGGAAACT GACCGCAGCA
CACTCCACGA CGGACTTCCA GTACTTCATC ACGAAGGACG GCTGGGACTC CTCGAAGCCG
CTGACCCGGG CCGACCTGGA CGCGACGCCG TTCCTGACCG TCCCGTTCAG CGGACAGCCA
CCGTCCGATG TGTCCCACTC GGGGACGCTG CCGAACAAGT CCGGCAAGCA TCTCATCCTC
GGCGTGTGGA CCATCGCCGA CACCGCCAAC GCCTTCTACC AATGCTCGGA CGTCAACTTC
GGTTAA
|
|---|
| Protein sequence | MPAPRTVRVG ISVLAGTAAA VMLSVLGASP ASAHGYTTSP TSRAAFCADG TVTDCGQIQW
EPQSVEGPKG FPAAGPQDGS ICAGGNGQFA ELDDPRGGQW PATDVQPGGS MNFQWKLTAA
HSTTDFQYFI TKDGWDSSKP LTRADLDATP FLTVPFSGQP PSDVSHSGTL PNKSGKHLIL
GVWTIADTAN AFYQCSDVNF G
|
|---|
| |