Gene Snas_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1610 
Symbol 
ID8882799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1699014 
End bp1700240 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510406 
Protein GI291299128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.929195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0743787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGC AGCCCTCCAA TTCCTTCTTC GACAAGTCAA CGACTCAACC GGAATTCGCC 
AACGTGTTGC GCGGCTACGA CCGCAACCAG GTTGACGACT TCGTACAGCG CGTCAATGCG
GCCCTGAGCC AAATCGACAA CGCTCGCGGC GAGGCCGAGG CACGCATGAC CGACGCTCAG
CGCCGGTTGC GTCAGGCCGA ACAGCGGGTC ACCGGCCTCG AGCAGAAGCT GGCCGAACAG
GCCCAGCAGC TCGAGGAGAA CAGCCGTCCC ACGTTGTCGG GCCTGGGAAC GCGCGTCGAG
CAGATCCTGC GGTTGGCCGA GGAGCAGGCC AACGAGCACC GGGCTGAGGC CAAGCGCGAG
ACCGAGGGCA TCCTGTCCTC CGCGCGCCTC GAGGCCCGCG AGATCACCGA CGCCGCCCGC
GAGGAGGCCA ACGGCCTCAA GCAGGCCGCC GAACGTGAGG CCGGAAACGT CCGCACCGCC
GCCGAGCGCG AGGCCGCCGA GCTGCGGGTG CAGGCCCGCC GCGAGGCCGA GACCCTGCGC
GCCGACGCCG AGCGCGACAC CAAGCAACTG CGCACCTCCA CCGGCCACGA GGTCGCCGAG
CTGAAGGCCA GTGTGGAGCG CGAGGTCGCG AGCCTGCGGG CCACCGCCGA CCGCGAGATC
ACCCAGCTGC GCGCCAAGGC CGCCAAGGAC GCCGAGGAGA AGCGCGCCGA GGCCGCGAAA
CTGTTCGCCG ACGCCAAGGA GAAGCGCGAC AAGGAACTCC AGGCGCTGGA CCTGGAGATC
GCCGAGCGTC GCGAGAAGGC CGAGCGCGAG GAGTCGCAGC GGCACGCCGA GGCGATCGCC
GCGACCCAGA AGCTGGTCTC CGAGGCCGAG TCCCGGGCCC GCACCGCCGA GGAGCGCGCC
AAGGAGATCG AGACCGCCGC CGAGACCCGC AAGGTCGAGT CGGAGAAGTA CGCGCAGCAG
ACCACCGAGA AGGCCAAGAA CGCCGCCGAC AAGGCGCTGT CGGAGGCCAA GGCCGAAGCC
ACCCGTCTGG TGGCCGACGC CAAGGCCGAG GCCGAGCGGA CCACGACCAA GGCCCGCAAG
GAGGTCGACA AGCTCACCCG CGAACGCGAC AGTGTCCAGT CGACGCTGCG CAACATGATG
GCCAACCTGC AGGGCATCGG CCTGAGTGCC GGCGGCGACG CCGCCGCCGC GGAAGAGAAG
AAGGACTCCG AGGTCTCGGC GTCCTGA
 
Protein sequence
MSQQPSNSFF DKSTTQPEFA NVLRGYDRNQ VDDFVQRVNA ALSQIDNARG EAEARMTDAQ 
RRLRQAEQRV TGLEQKLAEQ AQQLEENSRP TLSGLGTRVE QILRLAEEQA NEHRAEAKRE
TEGILSSARL EAREITDAAR EEANGLKQAA EREAGNVRTA AEREAAELRV QARREAETLR
ADAERDTKQL RTSTGHEVAE LKASVEREVA SLRATADREI TQLRAKAAKD AEEKRAEAAK
LFADAKEKRD KELQALDLEI AERREKAERE ESQRHAEAIA ATQKLVSEAE SRARTAEERA
KEIETAAETR KVESEKYAQQ TTEKAKNAAD KALSEAKAEA TRLVADAKAE AERTTTKARK
EVDKLTRERD SVQSTLRNMM ANLQGIGLSA GGDAAAAEEK KDSEVSAS