Gene Snas_1596 details

Gene Information

• Locus tag: Snas_1596
• ID: 8882785
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Stackebrandtia nassauensis DSM 44728
• Kingdom: Bacteria
• Replicon accession: NC_013947
• Strand: -
• Start bp: 1678711
• End bp: 1682124
• Gene Length: 3414 bp
• Protein Length: 1137 aa
• Translation table: 11
• GC content: 60%
• Product: helicase domain-containing protein
• Protein accession: YP_003510392
• Protein GI: 291299114

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTGCTCG ATGAAATTAC CCCCGGATCA CGGCTGGCAG GGGTCATTCC CGCTGAGGTT 
GTCACCGTCA TCGCGGCACA GTGGCATGGC ACCGACGCAT TGGAACTGAC CTACAAGACT 
GCTGCGGGAG GACTCGCGCA GCGAGTGGTG TTTCGAAAGG ACGAACACTC GCTTTCGACA 
GCCCGTACCG GGAGTCGTGC CTTCGACGCC CCCGCGAATG ACTTCAAGCT CGTCGCCGAA 
GCACAGCGGA TCACACTGGC TGGTCTGTTC GATCCGATGC TCGCGGTCGC GACCAGCGAC 
GTCCGGCCGT TGCCGCACCA GATTCACGCC GTCTACGGCG AACTACTTCC ACGTACACCG 
ATGCGATTCC TGCTCGCGGA CGACCCGGGC GCAGGCAAGA CGATCATGGC GGGGCTTTAC 
ATCAAGGAAC TGATCCTGCG CGACGACGTG CAGCGTTGTC TCGTAGTGGC ACCGGGCGGA 
TTGGTCGAAC AGTGGCAGGA CGAACTGTTC TTCAAGTTCG GACTGCGTTT CGACCTGCTC 
ACGAACCAGC TCATCGAGGC GAGCGTCAAT CTGAACGTCT TCGAATCCAG CCCGCTGTTG 
ATCGCGCGCA TGGATCAACT CTCCCGAAAC GATGAGTTGC GAGCACAGTT GAAGGAGACC 
GAATGGGATC TGATCATCGT GGACGAAGCG CATCGGATGG GAGCACACTA CTTCGGCGGC 
AAGCTGGAGA AGACCAAGCG CTTCCAGCTC GGTGAGCTAC TCGGCCAGAT CACCCGCCAT 
TTCCTGCTGA TGACGGCGAC CCCTCATTCG GGCAAGGAAG AAGACTTCCA ACTTTTCCTC 
ACGCTGTTGG ACCGGGACCG GTTCGAGGGC CGCTCCAAGT CCGCCGTCGA CACTGGCGGC 
ATCATGAGAC GAATGATCAA AGAGGACCTC CTCACTTTCG ACGGCAGGAA ACTGTTTCCC 
GAGCGGATCG CCGAGACTGT TCCATATGAG CTCACCGCCG ATGAATGCCA CTTGTATGAG 
CGGGTTACCG AATACGTGCG CACCGGAATG AACCGAGCGG AGAAGCTTGG TGGCAAACGA 
AGGAACACCG TCGGGTTCGC GCTGACGGTG CTGCAGCGTC GACTCGCCTC CAGCCCGGAA 
GCGATCTATC AGAGTCTGGT TCGGCGGTCA CGGCGTCTGG AGCGCAAGAA GCGCGAGATC 
CTTGACGGCA CGAATCAGGA GATCGAACCC TCCATCGATC TTCGTGGACT CGACTTCGAT 
GATTACAACG CCGAAGAGAT CGAAACCCTC GAGGAGGAAC TCCTCGACTC CGCGACCGCG 
GCCCAGACTG TGACAGAACT CGAAAAAGAG CTGGACGATC TGACCACGTT GACGACACTC 
TCCAAGCAGG TCCGTGACTC AGGAAAGGAC CGCAAATGGA CTGAATTGTC GACAATCCTC 
CAAGACAACG CACTGATCAC AGACAAGAGC GGCTCCCCGC GGAAGTTCAT CATCTTCACC 
GAACATCGCG ACACCCTCGA GTACCTCCGG GGGCGTATCA CCTCTCTCCT GGGCCGCCCA 
GACGCTGTCC GAGCCATCCA CGGTGGCGTA CGCCGCGGTG AGCGACGTCA GATCACCGAG 
GAGTTCACAC AGAACAGTGA CTGCCAAATC CTCATCGCCA CCGACGCCGC CGGTGAGGGC 
TTGAACCTGC AAGCCGCTCA CCTGATGGTG AACTATGACC TGCCATGGAA TCCGAACCGG 
ATCGAACAAC GTTTCGGCCG GATCCACCGC ATCGGCCAGG AAGAGGTCTG TCGGCTGTGG 
AACATCGTCG CTTCCAACAC ACGCGAGGGT GAGGTTTTCA CGCGCTTGCT GGAGAAGATC 
AGCGAGATGG GCAGAGCGTA TGGGGGAAAG GTGTTCGACG TCCTCGGTGA GGCGTTCACC 
GAGACCCCAC TGCGAAACCT GCTGTTGGAC GCGATCCAGT ACGGCGAACG CCCCGATATC 
CGAGCGAAGA TGCACCAGAT CATCGATGCC AGCGTCGGGG ACGGCGTCAA AGAACTGCTG 
AACGAACGGG CTCTCGCAGT CGAGCACCTC GCTGAAGCGG ATCTCGCGGA ACTACGTGCC 
GCAATGGACG AAGCACGTGC CCGACGCCTA CAACCGCACT ACATCGAGCT CGCCTTCAAA 
GCGGCGTTCA CCCGGCTCGG CGGTCGTATC GCAAGACGAG AACGCGGGCG TTACGAGATC 
ACCAACGTGC CGGCGCATCT CAGGACCGGT CAGGGCTGGC CCATCGCGAC ACGCTACGAG 
CGGGTTACCT TCGATCTTGA TCATGCCACT GGTGCTGCTG GCCAACCTCG GGCAGATCTT 
CTAGCGCCCG GACATCCGCT GCACGACGCT GTGATGACTG ACTCCATCAA GAAGTTCAAC 
AGCGTTCTCA ATTCCGGCAC TGTGCTGGTG TCCGCGACCC TCGACGAGAT CCACTTGCTC 
GTGGGCGTCA TCGAGGAGGT CGTGGACGCG ACCGGAGCCA GCGTGGCGCG CCGTTTCGGG 
TATGCGTTCG TCGACAGTTC CGGTGTGGTC AAACCTGCTG GACCGGCGCC TTACCTCGAC 
TGTGTCGCCG CTCCTGAGAC GCCCACCGTC GCGGGGGTTC GCGCTCAATC GTGGCTTGCG 
GACGCGGAGG ACAAGGCGAT CAGCTGGATC ATCACCAACC GGCTACCGGA CTACCTTGCC 
GAGGTTCAGT CCTCGCGCAC TACCGAACTC TCCAAGACAC GCCACCTGGT CATCCAAAGG 
CTCCGCGCGG AAAGTGAGCG CCTTCTTTAC GATGCCGCGA TCGCGTCGGA AAACGAACAC 
AAGAGCGAGA AGCCAAAAGA GTCGTCCGAA AGCCTCAACC GCAAGGCCAT GGAACTCGAC 
GTGCGGCTTC GCCGTCGACT GGAACTGTTC GACCAGCAGC TCTCGATGTC GACGAAGCCG 
CCGCTCATAG TCACCGCCGC ACTCATTCTG CCGGTCGACG TGTTTGACGG AGATCTGCCG 
CCTAACGCAC CCATACACGC CAAAGAGACC AAGGAGGTCG AACGGCGGGG CGTCGACCTG 
GTGATGGCAA GCGAACAGGG ACTTGGACGG CGACCTGTTG AACAGCCATT CAACAACAAG 
GGTTTCGACA TTCTGTCCAC AGCTCCGAAC GGTGAAACTT TCCGAATTGA GGTCAAAGCA 
CGGATTGATG GTGCGAAGAA TTTCTTTGTC ACCCACAACG AGGTCCTGAC TGGCAAGAAC 
GCCGTGCCGC GGTATCGGCT TGCGCTGGTC AGGGTTGATC CGCAGGGCCC GGAGCATGAT 
GAAGTTCGTT ACCTCGATGA CCCTTTCGCC ACAATCGAGC TGGGCGATTT CGATGCCATG 
GGTATCAGCG CCGACTGGCC ACGTAACTGG AAGAAGGGTG CGCCACCCTT CTAA 

 

Protein sequence

MLLDEITPGS RLAGVIPAEV VTVIAAQWHG TDALELTYKT AAGGLAQRVV FRKDEHSLST 
ARTGSRAFDA PANDFKLVAE AQRITLAGLF DPMLAVATSD VRPLPHQIHA VYGELLPRTP 
MRFLLADDPG AGKTIMAGLY IKELILRDDV QRCLVVAPGG LVEQWQDELF FKFGLRFDLL 
TNQLIEASVN LNVFESSPLL IARMDQLSRN DELRAQLKET EWDLIIVDEA HRMGAHYFGG 
KLEKTKRFQL GELLGQITRH FLLMTATPHS GKEEDFQLFL TLLDRDRFEG RSKSAVDTGG 
IMRRMIKEDL LTFDGRKLFP ERIAETVPYE LTADECHLYE RVTEYVRTGM NRAEKLGGKR 
RNTVGFALTV LQRRLASSPE AIYQSLVRRS RRLERKKREI LDGTNQEIEP SIDLRGLDFD 
DYNAEEIETL EEELLDSATA AQTVTELEKE LDDLTTLTTL SKQVRDSGKD RKWTELSTIL 
QDNALITDKS GSPRKFIIFT EHRDTLEYLR GRITSLLGRP DAVRAIHGGV RRGERRQITE 
EFTQNSDCQI LIATDAAGEG LNLQAAHLMV NYDLPWNPNR IEQRFGRIHR IGQEEVCRLW 
NIVASNTREG EVFTRLLEKI SEMGRAYGGK VFDVLGEAFT ETPLRNLLLD AIQYGERPDI 
RAKMHQIIDA SVGDGVKELL NERALAVEHL AEADLAELRA AMDEARARRL QPHYIELAFK 
AAFTRLGGRI ARRERGRYEI TNVPAHLRTG QGWPIATRYE RVTFDLDHAT GAAGQPRADL 
LAPGHPLHDA VMTDSIKKFN SVLNSGTVLV SATLDEIHLL VGVIEEVVDA TGASVARRFG 
YAFVDSSGVV KPAGPAPYLD CVAAPETPTV AGVRAQSWLA DAEDKAISWI ITNRLPDYLA 
EVQSSRTTEL SKTRHLVIQR LRAESERLLY DAAIASENEH KSEKPKESSE SLNRKAMELD 
VRLRRRLELF DQQLSMSTKP PLIVTAALIL PVDVFDGDLP PNAPIHAKET KEVERRGVDL 
VMASEQGLGR RPVEQPFNNK GFDILSTAPN GETFRIEVKA RIDGAKNFFV THNEVLTGKN 
AVPRYRLALV RVDPQGPEHD EVRYLDDPFA TIELGDFDAM GISADWPRNW KKGAPPF