| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1552 |
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| Symbol | |
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| ID | 8882741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 1632382 |
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| End bp | 1633782 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_003510348 |
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| Protein GI | 291299070 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGC CCCCGTTGGT CGGGGCGATC GCCGACGACG TCACCGGCGC GACCGACGTC
GCGGTCGCGT TCCGCCGCAA CGGATTGCGG ACGTTCCTGT CGTTCGGGGT GTCTCCCGGG
CTCGACGTCG GTGCCGAGAC CGTGGTGGTC GCGTTGAAGA CGCGGATGAT CGAACCGGAT
GCGGCGGTGG CGCAGTCCCG AGCGGCGTGG GACTGGCTGC GGCGGTTGGG TGCGCGACGG
GTCTACTTCA AGTACTGCTC CACGTTCGAC TCGACGTCGC GAGGCAATAT CGGCCCCGTT
CTGGATGCTC TGGCGGATGC GACCGGGGCG GCGACGGTGG TGACCACGCC GTCGTCACCC
GAGCATGGCC GCACCCAGTA CGAGGGGCAT CTGTTCGTCG GCGATGTCCT GTTGGCCGAG
TCGCATATGC GCGACCATCC GGTGACCCCG ATGCGCGACT CGAACTTGCC TAGGCTGCTG
CGAGCCCAGA CTCGTGAAAC CGTTGGGCTG CTTGGCTACC GTGACGTCCT CGACGGCGAG
GCGGCTATCG CGCGGCGACT GGCGGCGGCG CGCGCTGACG GGGTGAGGTA TCTGCTCGCC
GACGCCGTGA CCGACGCCGA TCTGCGGCGG CTTGGTCGTG TCGTGGCGAA CGAGCCGCTG
ATGGCTGGTG CCGCGGGGCT GGCGGGTGGA ATCGCGGCGG CGCTGGCCGA AAAGCGCGGC
GAAGCCGCCG CGCCGCTGGC TGCACGCAGC CCCGGCGAAA CTGCCGCGCC GCTGGCCGAT
CGTCGCGACG AACCTGCGGC AGAGCTGGCC GCAGGCGGCC CCCGCGAAGC GATAAGTGCC
GCTCCTCTTG AGCACCAAGC GCCCCCGCCC CCAACCGGAC CAGCCGTGGT GCTGTCGGGC
AGCTGCTCGA AGCGCACCCT CGAACAAATC GCATACCTGC GACAGCACGA CCGGCCCGCG
TTCTTCCTCG ACGTGTCCGC CACCCCCGAC GCCGCAGCCC TCGCCGACAC CGCGCTCGCC
TGGTACGACA CGCTGCCCGC CGACGCCGCC CCGCTCATCT ACTCCTCGGT CGAACCCGAA
CGGCTGCACC ACATCCAACA GCGGATCGGC GTCGAACGCG CGGCCGCGAT CCTCGAGGAC
GCGACCGGCC GCATCGCCCA CGGACTGGCC GCACGGGGCG TCCGGCGGTT CATCGCCGCC
GGAGGCGAGA CCTCCGGTGC CGTCGTCGCC GCGTTGCGAG TCGACGGTGG ACTCATCGGC
ACCGAAGCGG CCCGAGGCGT CCCCTGGATC CACAGCCCGA CGGGCGATCT GAGCCTGCTG
CTGAAGTCCG GCAACTTCGG CGAACCGGAC CTTCTGGCCC GCGCCTCGGC CTCGGGAGGC
GACGATGTCC CCGCACGATG A
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| Protein sequence | MTEPPLVGAI ADDVTGATDV AVAFRRNGLR TFLSFGVSPG LDVGAETVVV ALKTRMIEPD
AAVAQSRAAW DWLRRLGARR VYFKYCSTFD STSRGNIGPV LDALADATGA ATVVTTPSSP
EHGRTQYEGH LFVGDVLLAE SHMRDHPVTP MRDSNLPRLL RAQTRETVGL LGYRDVLDGE
AAIARRLAAA RADGVRYLLA DAVTDADLRR LGRVVANEPL MAGAAGLAGG IAAALAEKRG
EAAAPLAARS PGETAAPLAD RRDEPAAELA AGGPREAISA APLEHQAPPP PTGPAVVLSG
SCSKRTLEQI AYLRQHDRPA FFLDVSATPD AAALADTALA WYDTLPADAA PLIYSSVEPE
RLHHIQQRIG VERAAAILED ATGRIAHGLA ARGVRRFIAA GGETSGAVVA ALRVDGGLIG
TEAARGVPWI HSPTGDLSLL LKSGNFGEPD LLARASASGG DDVPAR
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