Gene Snas_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1528 
Symbol 
ID8882716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1614807 
End bp1615391 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003510325 
Protein GI291299047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.680556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.906011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCCC ACACCCGCCG CCCCGGAACC GGCCCGCGGC AAGCTGAGCG GCTGTACCGC 
GTCGTCCTGG AACTGTTGCG CGAACACGGT TTCGACGAGC TGGCCATCGA GACCGTCGCG
CAGCGGGCCG GGGTCAACAA GACCACGATC TACCGCTGGT GGCCGTCCAA GGACGCCCTG
GTCGCCGACG CGCTGATCCA CTCCGAACTG CTCGACCTGG ACGTTCCCGA CACCGGCAGC
CTGCGCGGCG ACCTGACGGC CCTGGTGCGG CAGGTGCGGC TGCTGCTGTC GGGGGCCGAC
ACCGCGCCCA TCGCGACCTC GGTGTTCGCC GCGGCGGCCT CCCGACCCGA ACTGGCGGGG
CTGACGCGCG ACTTCTTCGC CGACCGGCTC AGCCGCGAGC GCGTCGTCTT CGAGCGCGCC
ATCGCCCGAG GCGACATCCA TCCCGACACC GACGTGACGT TGGCCGTCGA CCTGGCGCTG
GGAGCGGTGT GGACCCGTGT CGTGCTGCGC CAGCAGGACG TCGGCGAAGC CTTCGACGCC
GAGGTCACCG ATCTGCTGCT GGCTGGACTG ACGCCGCGAA CCTAA
 
Protein sequence
MTSHTRRPGT GPRQAERLYR VVLELLREHG FDELAIETVA QRAGVNKTTI YRWWPSKDAL 
VADALIHSEL LDLDVPDTGS LRGDLTALVR QVRLLLSGAD TAPIATSVFA AAASRPELAG
LTRDFFADRL SRERVVFERA IARGDIHPDT DVTLAVDLAL GAVWTRVVLR QQDVGEAFDA
EVTDLLLAGL TPRT