Gene Snas_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1519 
Symbol 
ID8882707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1606371 
End bp1606940 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content72% 
IMG OID 
Productisochorismatase hydrolase 
Protein accessionYP_003510316 
Protein GI291299038 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.226465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG CGCTCATCAT CGTCGATGTC CAAAACGACT TCTGTGAAGG CGGGTCGCTG 
GCGGTGGCCG GGGGCGCGAG CGTCGCCGCC GACATCTCCG CCATGGTGGC CGCCGAACCC
GGCCGCTGGG ACCGGATCGT GGCCACCCGC GACCGGCACA TCGACCCGGG ACGGCACTTC
TCGACCGAAC CCGACTTCGT CGACTCCTGG CCGCCGCACT GCGTGGTGGG CACCGATGGC
GCCGACTTCC ATCCCGACCT GACCGTCTCA CCGGAGGCGA TCTTCGACAA GGGCGCCTAC
TCGGCGGCCT ACTCCGGTTT CGAGGGCAGC GCGGGGGAGG ACGACCTGGC GGGCTGGCTG
CGCGGCCACG AGACCACCGC GGTCGACATC GTCGGCATCG CCACCGACCA CTGTGTCCGG
GCCACCGCCC TGGACGCGGC CCGCGAGGGC TTCGACACCA CCGTCCTGCT CGACCTGACC
GCCGGGGTCG CCGCCGACAC CGTCGAGACG GCGCTGACCG AACTGCGCGC CGCCGGAGTG
ACCCTCGCCG GTACCCCGCG CGTGGGCTAG
 
Protein sequence
MARALIIVDV QNDFCEGGSL AVAGGASVAA DISAMVAAEP GRWDRIVATR DRHIDPGRHF 
STEPDFVDSW PPHCVVGTDG ADFHPDLTVS PEAIFDKGAY SAAYSGFEGS AGEDDLAGWL
RGHETTAVDI VGIATDHCVR ATALDAAREG FDTTVLLDLT AGVAADTVET ALTELRAAGV
TLAGTPRVG