Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1434 |
Symbol | |
ID | 8882621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 1517561 |
End bp | 1519426 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | SNF2-related protein |
Protein accession | YP_003510233 |
Protein GI | 291298955 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0748383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.519779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTTGGT GGGGCGGGGG CTCCGATCTC GTCGAAGCCG TCCGCAAACA CGGACTCCCC GACGGCGCTC CCGGCAGACT CCGACTGGCG GTCCCCACAC AGGACGGTGA CGGTTTCACC GTCGACAGGT TCCCGGTGCG GCTGGTCCCG TTGACGCAGG CCGCTCCCGC GCTGGCGGCG CTGCGTGTCG ACAAGCACAC CAGTGACTCA CTGCGCGCCT GGCGGGCCGC CGCGATCCTG GCACTGTCGC AACCGGACCC GGGCAAGCTG GCCGAACTGG CGGAGATGAT GCCCGCCGCC GCCCACGCCC TGTGCCGGGA CGAGGCGAGT CTGTGGCCCG CCGACACCCT CGTCAGCGCC TTCGCCCATG CCACCCGGGC GACCTATATG TCCGAGAAGG ACACCGCGCG GGAGCTGCGC GACGCCCAGG AGGAGCTGGC CCCCGACGCC CGGGTGGAGG CCACGCTGCG TCCCTACCAG CGGCGCGGGC TGGCCTGGCT GCGCGCCGTC GCGGCCCACC ACCGCGGCGC GCTGCTGGCC GACGACATGG GTCTGGGCAA GACGCTGCAG ACCATCGCGC TGTTGGCGGA ACGGACCTCC AACCGTCCAC ATCTGGTGGT GTGCCCCACG TCGGTGGTCG GCAACTGGAC CCGTGAGATC GCCCGGTTCG CGCCGGACCT CCCGGTTGTG CTCCACCATG GACCGTCGCG TCGCGAAGTG GCCCGTTTTC CCGATGGTGC GGTCGTTGTC ACCAGCTATA ATCTCCTGCT GCGCGATATC GACCTTTTGT CCATACTTGA TTGGGATGTG GTTGTTCTCG ATGAGGCCCA GCAGATCAAG AATCAGGCAT CCCAGACCGC CAAAGCCGCC CGAATTCTGC CCGCCCAGGC TCGCGTCGCA TTGACCGGTA CCCCGGTGGA AAACCGGCTG GGTGAACTGT GGTCAATTAT GGATTTCGTG AATCCCGGCA TTCTCGGCTC ATATTCACGG TTCCAGAAAC GATTCGCCAG CCCGATCGAA TCGCGCGCCG ACGCCCGCGT CACCGAACGA CTGCGCGGCA TCGTGCAGCC GTTCCTGTTG CGCCGCCTCA AAAGCGAGGT GGCCGCGGAT CTGCCCGCCA AGCAGGAGTC CACTGTCGCG TGCACGCTGA CGTCCGAACA GGCCAAACTG TATTCGGCCG CCGTGGAGCG AGCCATGAAC GACGGCCTGG GTTCCGGTTT CGAGCGGCAC GGCCGGGTCC TCAAACTGCT GACCGAACTC AAGCAGATCT GCAACCATCC GGCGCAGTTC CTGCGTCAGG AGCACCCGCT GACCGGTCGC TCCGGAAAGC TCGCCCGCGC CACCGAGATG CTCGCCGAGG CCGTCGCCGA GGGCGCCCAG TCGCTGGTGT TCACGCAGTA CCGGGTGATG GGCGAGCTGT TGGCCACGCA CCTGGCCGCC GAGCTGGGGC TGGAGAAAGT GCCGTTCCTG CACGGCGGGG TCTCGCAGCC CGGCCGGGAC GCGATGGTGG CCGAGTTCCA GTCGGGCGAC GATCCGCCGC CCATCCTCAT CGTCAGTCTC AAGGCGGGCG GCACCGGTCT CAACCTCACC GCCGCCACCC ACGTCCTGCA CTACGACCGG TGGTGGAACC CGGCCGTGGA GGACCAGGCC ACCGACCGGG CGCACCGCAT CGGACAGACC AAGCCCGTAA CCGTCTACAA GCTCGTCACC GGCGGCACGC TCGAGGAGCG CATCTCGGAC CTGTTGGAGC GCAAGCGTTC CCTGGCCGAG TCGATCGTCG GCACCGGGGA GGACTGGATC ACCAACATGG ACGACAAGCA GCTGCGGCAG CTGATCGAGC TGTCCGACGT GGCGGTGACC GAATGA
|
Protein sequence | MVWWGGGSDL VEAVRKHGLP DGAPGRLRLA VPTQDGDGFT VDRFPVRLVP LTQAAPALAA LRVDKHTSDS LRAWRAAAIL ALSQPDPGKL AELAEMMPAA AHALCRDEAS LWPADTLVSA FAHATRATYM SEKDTARELR DAQEELAPDA RVEATLRPYQ RRGLAWLRAV AAHHRGALLA DDMGLGKTLQ TIALLAERTS NRPHLVVCPT SVVGNWTREI ARFAPDLPVV LHHGPSRREV ARFPDGAVVV TSYNLLLRDI DLLSILDWDV VVLDEAQQIK NQASQTAKAA RILPAQARVA LTGTPVENRL GELWSIMDFV NPGILGSYSR FQKRFASPIE SRADARVTER LRGIVQPFLL RRLKSEVAAD LPAKQESTVA CTLTSEQAKL YSAAVERAMN DGLGSGFERH GRVLKLLTEL KQICNHPAQF LRQEHPLTGR SGKLARATEM LAEAVAEGAQ SLVFTQYRVM GELLATHLAA ELGLEKVPFL HGGVSQPGRD AMVAEFQSGD DPPPILIVSL KAGGTGLNLT AATHVLHYDR WWNPAVEDQA TDRAHRIGQT KPVTVYKLVT GGTLEERISD LLERKRSLAE SIVGTGEDWI TNMDDKQLRQ LIELSDVAVT E
|
| |