Gene Snas_1367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1367 
Symbol 
ID8882554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1444558 
End bp1445232 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510167 
Protein GI291298889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.824327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCG AACCCACCGA CGCGGCCACT GCGTCGCGAA TGGAACTGGC ACGCCGGGAA 
CGCACCGAGC TCGCCGGATT CCTCGCCGAA CTGTCGGACG AGCAGTGGCA GGCGCCGAGC
CTGTGCGAGG GCTGGCGGGT GCGGGACGTG GTGGCCCACG TGATCAGCTA CGACGAACTC
AGCCGCTGGG CCACCGCCAG GCGACTCCTG CGAGCGGGGT TCAGCCTCAA GCGGGGCAAC
ACCATCGGCT TGGCCCACTA CGAGTCACAC ACGCCACGAC AACTGCTCGA CGCGCTCAAC
GCGCACCTCA CCCCACGGGG GCTGACCACG GCGTTCGGCG GCATGGTCGC GCTCGTCGAC
GGGACGATCC ACCACCAGGA CATCCGCCGC CCGCTGGGCA TGCCCCGCCG GATCCCGCCG
GAACGGCTGG CCGTGGTGCT GCGGCTCGCC CTGGGAGCCC CGCCGATCAA GGCGCGCCAG
CGGGCCAAGG GGCTGCGGCT GGTCGCCACC GACTGCGACT TCGTCACCGG CACGGGTCCA
GAAGTACGCG GGCCGGGCGA GGCGCTGCTC ATGACGCTGG CGGGACGCCC CGGCGTCGCC
AGCGAGCTGG CCGGCGACGG CCAACCGATC CTCGCCGGCC GGGTATCCGA GCGCGCCATC
CCAGACCCGA GCTGA
 
Protein sequence
MSPEPTDAAT ASRMELARRE RTELAGFLAE LSDEQWQAPS LCEGWRVRDV VAHVISYDEL 
SRWATARRLL RAGFSLKRGN TIGLAHYESH TPRQLLDALN AHLTPRGLTT AFGGMVALVD
GTIHHQDIRR PLGMPRRIPP ERLAVVLRLA LGAPPIKARQ RAKGLRLVAT DCDFVTGTGP
EVRGPGEALL MTLAGRPGVA SELAGDGQPI LAGRVSERAI PDPS