Gene Snas_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1315 
Symbol 
ID8882502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1393595 
End bp1394533 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content66% 
IMG OID 
ProductATP synthase F1 subunit gamma 
Protein accessionYP_003510117 
Protein GI291298839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.685666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGCGC AGCTACGTGT GCTGCGGCAG CGGATCAAGA CCACCCAGTC CATCAAGAAG 
ATCACCAAGG CGATGGAGCT GGTGGCGACC AGCCGCGTCG GTAAGGCACA GGCGCGGGTG
GCGGCTTCGC TGCCCTACGC CCGGGCCATC ACGGACGTGA TGACCGCGCT GGCCTCCAGT
GCGAACATCG ACCATCCGCT GCTGAAGCCG CGCGATGTCG TCCGCCGTTC CGGCGTGCTG
GTCCTGACCG GCGACAAGGG AATGTGTGGC GGCTACAACA TCAACGCGGT GCGCACCGCC
GAACAGTTGA TCTCTCGGCT CGCCGAAGAG GGCAAGAACC CGGTGCTGTA CGTCGTGGGT
CGCTCCGGAG TGGACTACTA CCAGTTCCGC AAGCGTGAGA TCCAGAAGTC CTGGGCCGGT
TTCACCGATT CGCCGACCGT CGCCGACGCC GCCGAGATCA CCAAGACACT GTTGACGGCC
TTCGTCAACG GTGCCGACGA CGACGGCGAC AACCCGGGTG CGGACGGCGT GCTGGGTGTC
GACGAGCTCC ACATCGTCCA CACCAAGTTC GTGTCGCTGC TGACGCAGAA TCCGGACGCG
AAACAGCTGG CGCCCATGGA GGTCGAGGAG GTCGAGGCCG ACGATTCGGA CCCGAACCTG
ATCCTCCCGG CGTACGAGTT CGAACCGGAC CCGGAAGAGC TGCTGGACGC GCTGCTGCCG
AAGTACCTGA CGACCCGCGT GTACGCCGCT CTCATCGAGG CGGCGGCCAG CGAGTCGGCG
GCGCGGCGTC GCGCCATGAA GGCGGCGACG GACAACGCCG AAGAACTGCT CAAGACCCTG
ACGCGGGAGC GAAACGCCGC GCGGCAGGCG GAGATCACTC AAGAGATCAG CGAAATCGTC
GGCGGCGCGA GCGCGCTGGC CGCGACGGGA AGTGAGTAA
 
Protein sequence
MGAQLRVLRQ RIKTTQSIKK ITKAMELVAT SRVGKAQARV AASLPYARAI TDVMTALASS 
ANIDHPLLKP RDVVRRSGVL VLTGDKGMCG GYNINAVRTA EQLISRLAEE GKNPVLYVVG
RSGVDYYQFR KREIQKSWAG FTDSPTVADA AEITKTLLTA FVNGADDDGD NPGADGVLGV
DELHIVHTKF VSLLTQNPDA KQLAPMEVEE VEADDSDPNL ILPAYEFEPD PEELLDALLP
KYLTTRVYAA LIEAAASESA ARRRAMKAAT DNAEELLKTL TRERNAARQA EITQEISEIV
GGASALAATG SE